RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 DHRS11Q6UWP2 260 aa9.91□□□□□ -0.82
SAMM50-204ENST00000493161 PINX1Q96BK5 328 aaKnown RBP9.91□□□□□ -0.82
SAMM50-204ENST00000493161 MOB3AQ96BX8 217 aa9.91□□□□□ -0.82
SAMM50-204ENST00000493161 TMEM56Q96MV1 263 aa9.91□□□□□ -0.82
SAMM50-204ENST00000493161 TXN2Q99757 166 aa9.91□□□□□ -0.82
SAMM50-204ENST00000493161 ZNF2Q9BSG1 426 aaPredicted RBP9.91□□□□□ -0.82
SAMM50-204ENST00000493161 SCRT1Q9BWW7 348 aa9.91□□□□□ -0.82
SAMM50-204ENST00000493161 PRNDQ9UKY0 176 aa9.91□□□□□ -0.82
SAMM50-204ENST00000493161 X6R8D5 127 aa9.91□□□□□ -0.82
SAMM50-204ENST00000493161 PKD1P98161 4303 aa9.91□□□□□ -0.82
SAMM50-204ENST00000493161 RTL8CO15255 209 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 GNG7O60262 68 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 PMP2P02689 132 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 MED14OSP0DP75 135 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 RPL11P62913 178 aaKnown RBP9.9□□□□□ -0.82
SAMM50-204ENST00000493161 IZUMO2Q6UXV1 221 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 ZNF767PQ75MW2 155 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 TRPT1Q86TN4 253 aaKnown RBP9.9□□□□□ -0.82
SAMM50-204ENST00000493161 SPARTQ8N0X7 666 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 CADM3Q8N126 398 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 KRTAP4-5Q9BYR2 181 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 FXYD6Q9H0Q3 95 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 ZFAND3Q9H8U3 227 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 CLEC5AQ9NY25 188 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 CELA1Q9UNI1 258 aa9.9□□□□□ -0.82
SAMM50-204ENST00000493161 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 A0A1B0GU03 582 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 PRSS29PA6NIE9 313 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 KNCNA6PVL3 124 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 M0R2N4 97 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 IGKV1-39P01597 117 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 IGKV1D-39P04432 117 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 SPINK9Q5DT21 86 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 STHQ8IWL8 128 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 TSPAN14Q8NG11 270 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 FKBP11Q9NYL4 201 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 RABAC1Q9UI14 185 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 BLOC1S6Q9UL45 172 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 SSR3Q9UNL2 185 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 PUS1Q9Y606 427 aaKnown RBP eCLIP9.89□□□□□ -0.83
SAMM50-204ENST00000493161 AGRNO00468 2067 aa9.89□□□□□ -0.83
SAMM50-204ENST00000493161 A0A0A6YYH2 397 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 A6NJ64 397 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 ZNF705EA8MWA4 302 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-204ENST00000493161 EIF4EP06730 217 aaKnown RBP9.88□□□□□ -0.83
SAMM50-204ENST00000493161 MIFP14174 115 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 CBX5P45973 191 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 IZUMO4Q1ZYL8 232 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 PHLDA2Q53GA4 152 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 ZNF114Q8NC26 417 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 SEC22AQ96IW7 307 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 GINS3Q9BRX5 216 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 IFT46Q9NQC8 304 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 DIABLOQ9NR28 239 aa9.88□□□□□ -0.83
SAMM50-204ENST00000493161 TRAV2A0A0B4J234 112 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 K7EQG2 157 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 GPR31O00270 319 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 SCAND1P57086 179 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 PRCDQ00LT1 54 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 C12orf74Q32Q52 190 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 PVRIGQ6DKI7 326 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 CSNK1G2-AS1Q8NCQ2 148 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 DUSP18Q8NEJ0 188 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 BORCS5Q969J3 196 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 RNF126Q9BV68 326 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 MRPL36Q9P0J6 103 aaKnown RBP9.87□□□□□ -0.83
SAMM50-204ENST00000493161 ANAPC10Q9UM13 185 aa9.87□□□□□ -0.83
SAMM50-204ENST00000493161 TMEM50AO95807 157 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 CD5P06127 495 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 PPP5CP53041 499 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 GABARAPL2P60520 117 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 ZNF600Q6ZNG1 722 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 LYSMD2Q8IV50 215 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 CMTM1Q8IZ96 169 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 POM121L12Q8N7R1 296 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 STXBP6Q8NFX7 210 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 OR4A16Q8NH70 328 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 TSC22D3Q99576 134 aa9.86□□□□□ -0.83
SAMM50-204ENST00000493161 DEFB131BA0A096LNP1 70 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 LOC100506127A0A0U1RQW1 187 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 NAT1P18440 290 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 HSPA13P48723 471 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 HSPE1P61604 102 aaKnown RBP9.85□□□□□ -0.83
SAMM50-204ENST00000493161 MLANAQ16655 118 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 ACTL10Q5JWF8 245 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 MORN3Q6PF18 240 aaPredicted RBP9.85□□□□□ -0.83
SAMM50-204ENST00000493161 H2BFWTQ7Z2G1 175 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 TBC1D26Q86UD7 250 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 OR5H2Q8NGV7 314 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 MRGPRFQ96AM1 343 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 TBC1D24Q9ULP9 559 aa9.85□□□□□ -0.83
SAMM50-204ENST00000493161 AMBPP02760 352 aa9.84□□□□□ -0.83
SAMM50-204ENST00000493161 SPP1P10451 314 aa9.84□□□□□ -0.83
SAMM50-204ENST00000493161 NPPCP23582 126 aa9.84□□□□□ -0.83
SAMM50-204ENST00000493161 HRH1P35367 487 aa9.84□□□□□ -0.83
SAMM50-204ENST00000493161 TGFBR1P36897 503 aa9.84□□□□□ -0.83
SAMM50-204ENST00000493161 NPBWR1P48145 328 aa9.84□□□□□ -0.83
SAMM50-204ENST00000493161 OR6F1Q8NGZ6 308 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms