RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 NAA60Q9H7X0 242 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 SRD5A3Q9H8P0 318 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 HEYLQ9NQ87 328 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-232ENST00000489053 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-232ENST00000489053 CACFD1Q9UGQ2 172 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 KLK9Q9UKQ9 250 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 SELENOKQ9Y6D0 94 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 CEPT1Q9Y6K0 416 aa6.91□□□□□ -1.3
HDAC6-232ENST00000489053 DBX1A6NMT0 343 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 A8MZ25 164 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 CORTO00230 105 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 ST8SIA3O43173 380 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 GSTZ1O43708 216 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-232ENST00000489053 MT-CO2P00403 227 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 IGKV1-39P01597 117 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 IGKV1D-39P04432 117 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 AKR1C4P17516 323 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 UCP1P25874 307 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 TNFSF8P32971 234 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 ETV6P41212 452 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 SRPXP78539 464 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 IZUMO4Q1ZYL8 232 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 SPANXN2Q5MJ10 180 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 TMEM268Q5VZI3 342 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 UNQ9165/PRO28630Q6UXU0 137 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 TMEM61Q8N0U2 210 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 Q8N1Y9 231 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 TOMM5Q8N4H5 51 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 ZNF114Q8NC26 417 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 RBPMSQ93062 196 aaKnown RBP6.9□□□□□ -1.3
HDAC6-232ENST00000489053 NARS2Q96I59 477 aaKnown RBP6.9□□□□□ -1.3
HDAC6-232ENST00000489053 TXN2Q99757 166 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 THAP7Q9BT49 309 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-232ENST00000489053 SLIRPQ9GZT3 109 aaKnown RBP6.9□□□□□ -1.3
HDAC6-232ENST00000489053 HIPK2Q9H2X6 1198 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 MLXQ9UH92 298 aa6.9□□□□□ -1.3
HDAC6-232ENST00000489053 IGHV3OR16-8A0A075B7F1 116 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 RPS10-NUDT3A0A1W2PQS6 291 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 ANKRD20A5PA0PJZ0 165 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 OR4C46A6NHA9 309 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 C3orf84H3BNL1 204 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 K7EIM0 57 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 ZNF207O43670 478 aaKnown RBP6.89□□□□□ -1.31
HDAC6-232ENST00000489053 IGKV1-5P01602 117 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 LYL1P12980 280 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 OPRK1P41145 380 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 SPCS3P61009 180 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 HAGHQ16775 308 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 TRIQKQ629K1 86 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 TMED4Q7Z7H5 227 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 NOXA1Q86UR1 476 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 DEFB125Q8N687 156 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 SPAG8Q99932 426 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-232ENST00000489053 CHRDL1Q9BU40 450 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 ZNF436Q9C0F3 470 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-232ENST00000489053 C5orf66Q9H5L9 145 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 C19orf73Q9NVV2 129 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 DMRT1Q9Y5R6 373 aa6.89□□□□□ -1.31
HDAC6-232ENST00000489053 TRAV14DV4A0A0A6YYC5 116 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 A0A0B4J293 547 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 CRYM-AS1A6NIL9 109 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 C15orf62A8K5M9 175 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 ZNF785A8K8V0 405 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 CDS2O95674 445 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 IGHV3-48P01763 117 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 CD7P09564 240 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 SULT1A3P0DMM9 295 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 SULT1A4P0DMN0 295 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 EDN2P20800 178 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 HTR2BP41595 481 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 MFAP2P55001 183 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 RPL11P62913 178 aaKnown RBP6.88□□□□□ -1.31
HDAC6-232ENST00000489053 PAFAH1B2P68402 229 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 ADAMTSL5Q6ZMM2 481 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 TMEM116Q8NCL8 245 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 MUC7Q8TAX7 377 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 RTBDNQ9BSG5 229 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-232ENST00000489053 TMEM231Q9H6L2 316 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 CACNG5Q9UF02 275 aa6.88□□□□□ -1.31
HDAC6-232ENST00000489053 I3L2K1 104 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 K7EMT4 169 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 CD5P06127 495 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 CTSGP08311 255 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 VAMP1P23763 118 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 FCGR2BP31994 310 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-232ENST00000489053 CMC4P56277 68 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-232ENST00000489053 ETFRF1Q6IPR1 90 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 SELENOHQ8IZQ5 122 aaKnown RBP6.87□□□□□ -1.31
HDAC6-232ENST00000489053 LGI3Q8N145 548 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 OR52E5Q8NH55 327 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 OR1S1Q8NH92 325 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 IL17DQ8TAD2 202 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 IL22RA2Q969J5 263 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 TMEM230Q96A57 120 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 TM2D3Q9BRN9 247 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 GGTLC1Q9BX51 225 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 GPR132Q9UNW8 380 aa6.87□□□□□ -1.31
HDAC6-232ENST00000489053 IGKV3-7A0A075B6H7 116 aa6.86□□□□□ -1.31
HDAC6-232ENST00000489053 LOC102724200A0A096LPH7 203 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-232ENST00000489053 IGHV3-49A0A0A0MS15 119 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms