RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, human

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-206	ENST00000487602	FN1	P02751	2386 aa	Known RBP	6.3	□□□□□ -1.4
RBM28-206	ENST00000487602	TRAV41	A0A0B4J266	112 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602		G3V318	75 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	AP4M1	O00189	453 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	BCL2L11	O43521	198 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	FBXO24	O75426	580 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	RNASE1	P07998	156 aa	Known RBP	6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	GPX4	P36969	197 aa	Predicted RBP	6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	MFAP2	P55001	183 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	DLK1	P80370	383 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	SLC38A11	Q08AI6	406 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	CLINT1	Q14677	625 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	ECSCR	Q19T08	205 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	KLK9	Q2XQG4	91 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	C19orf54	Q5BKX5	351 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	SLC25A24	Q6NUK1	477 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	C19orf35	Q6ZS72	473 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602		Q8N2B8	174 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	RNASEH2C	Q8TDP1	164 aa	Known RBP	6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	PINX1	Q96BK5	328 aa	Known RBP	6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	FANCD2OS	Q96PS1	177 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	JMJD8	Q96S16	334 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	GGACT	Q9BVM4	153 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	ZNF702P	Q9H963	129 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	LINC00527	Q9UJ94	153 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	KLK9	Q9UKQ9	250 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	DMRT1	Q9Y5R6	373 aa		6.29	□□□□□ -1.4
RBM28-206	ENST00000487602	MXRA5	Q9NR99	2828 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	FAM181B	A6NEQ2	426 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	CORT	O00230	105 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	TSPAN9	O75954	239 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	DFFB	O76075	338 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	JTB	O76095	146 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	DEFA4	P12838	97 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	HIST1H1B	P16401	226 aa	Known RBP	6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	RPL15	P61313	204 aa	Known RBP	6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	UBA52	P62987	128 aa	Known RBP	6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	PRR20E	P86478	221 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	PRR20C	P86479	221 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	PRR20D	P86480	221 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	PRR20B	P86481	221 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	PRR20A	P86496	221 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	CD69	Q07108	199 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	MLANA	Q16655	118 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	RPL7L1	Q6DKI1	246 aa	Known RBP	6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	SLC51B	Q86UW2	128 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	LILRB2	Q8N423	598 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	CACNG8	Q8WXS5	425 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	NOL4L	Q96MY1	436 aa	Predicted RBP	6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	ATP5S	Q99766	215 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	TMEM147	Q9BVK8	224 aa		6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	ZNF471	Q9BX82	626 aa	Predicted RBP	6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	FNDC4	Q9H6D8	234 aa	Predicted RBP	6.28	□□□□□ -1.4
RBM28-206	ENST00000487602	IGLV11-55	A0A075B6I3	123 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	BORCS7-ASMT	A0A0B4J1R7	106 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	RPS10-NUDT3	A0A1W2PQS6	291 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	FNDC10	F2Z333	226 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602		I3L2K1	104 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	CYB5B	O43169	146 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	BRI3	O95415	125 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	MT-CO2	P00403	227 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	IFNA5	P01569	189 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	PRH1	P02810	166 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	CRYBA1	P05813	215 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	PPIF	P30405	207 aa	Known RBP	6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	EIF5A	P63241	154 aa	Known RBP	6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	EXOSC2	Q13868	293 aa	Known RBP	6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	ZNF266	Q14584	549 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	VWC2	Q2TAL6	325 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	TMEM95	Q3KNT9	176 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	ARSJ	Q5FYB0	599 aa	Predicted RBP	6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	ETFRF1	Q6IPR1	90 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602		Q6ZSV7	163 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	UBAC2	Q8NBM4	344 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	STOML3	Q8TAV4	291 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	MISP3	Q96FF7	219 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	PARD6G	Q9BYG4	376 aa	Predicted RBP	6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	ARV1	Q9H2C2	271 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	UQCC1	Q9NVA1	299 aa		6.27	□□□□□ -1.41
RBM28-206	ENST00000487602	TRBV9	A0A0B4J1U6	114 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602		H3BUA1	57 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602		K7EIM0	57 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	LCE2B	O14633	110 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	TCF21	O43680	179 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	SOX15	O60248	233 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	OR2J3	O76001	311 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	NDUFB8	O95169	186 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	MDK	P21741	143 aa	Predicted RBP	6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	OPRK1	P41145	380 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	CFHR3	Q02985	330 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	GAMT	Q14353	236 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	TREML4	Q6UXN2	200 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	SLC16A13	Q7RTY0	426 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	TMEM144	Q7Z5S9	345 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	BAP18	Q8IXM2	172 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	OR2T6	Q8NHC8	308 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	SCGB1C1	Q8TD33	95 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	SLC35E1	Q96K37	410 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	GON7	Q9BXV9	100 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	NPVF	Q9HCQ7	196 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms