RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 TXN2Q99757 166 aa13.88□□□□□ -0.19
ABCF3-214ENST00000480562 TRAV14DV4A0A0A6YYC5 116 aa13.87□□□□□ -0.19
ABCF3-214ENST00000480562 HPGDSO60760 199 aa13.87□□□□□ -0.19
ABCF3-214ENST00000480562 ELK1P19419 428 aa13.87□□□□□ -0.19
ABCF3-214ENST00000480562 UCP3P55916 312 aa13.87□□□□□ -0.19
ABCF3-214ENST00000480562 VBP1P61758 197 aa13.87□□□□□ -0.19
ABCF3-214ENST00000480562 RNASE12Q5GAN4 147 aaKnown RBP13.87□□□□□ -0.19
ABCF3-214ENST00000480562 C6orf62Q9GZU0 229 aaPredicted RBP13.87□□□□□ -0.19
ABCF3-214ENST00000480562 KMT2AQ03164 3969 aa13.87□□□□□ -0.19
ABCF3-214ENST00000480562 FRAS1Q86XX4 4008 aa13.87□□□□□ -0.19
ABCF3-214ENST00000480562 GNG7O60262 68 aa13.86□□□□□ -0.19
ABCF3-214ENST00000480562 ATF4P18848 351 aaPredicted RBP13.86□□□□□ -0.19
ABCF3-214ENST00000480562 PI3P19957 117 aa13.86□□□□□ -0.19
ABCF3-214ENST00000480562 ERHP84090 104 aaKnown RBP13.86□□□□□ -0.19
ABCF3-214ENST00000480562 FAM90A2PQ658T7 463 aa13.86□□□□□ -0.19
ABCF3-214ENST00000480562 TCF24Q7RTU0 167 aa13.86□□□□□ -0.19
ABCF3-214ENST00000480562 CMTM3Q96MX0 182 aa13.86□□□□□ -0.19
ABCF3-214ENST00000480562 FUNDC2Q9BWH2 189 aa13.86□□□□□ -0.19
ABCF3-214ENST00000480562 CSTL1Q9H114 145 aa13.86□□□□□ -0.19
ABCF3-214ENST00000480562 KLK5Q9Y337 293 aaPredicted RBP13.86□□□□□ -0.19
ABCF3-214ENST00000480562 VPS13DQ5THJ4 4388 aa13.85□□□□□ -0.19
ABCF3-214ENST00000480562 TOMM20LQ6UXN7 152 aa13.85□□□□□ -0.19
ABCF3-214ENST00000480562 TMEM217Q8N7C4 229 aa13.85□□□□□ -0.19
ABCF3-214ENST00000480562 ST8SIA2Q92186 375 aa13.85□□□□□ -0.19
ABCF3-214ENST00000480562 IGHV3-66A0A0C4DH42 116 aa13.84□□□□□ -0.19
ABCF3-214ENST00000480562 MPTX1A8MV57 137 aa13.84□□□□□ -0.19
ABCF3-214ENST00000480562 TNFAIP8O95379 198 aa13.84□□□□□ -0.19
ABCF3-214ENST00000480562 IGKV1-5P01602 117 aa13.84□□□□□ -0.19
ABCF3-214ENST00000480562 APOHP02749 345 aaPredicted RBP13.84□□□□□ -0.19
ABCF3-214ENST00000480562 PGAM2P15259 253 aa13.84□□□□□ -0.19
ABCF3-214ENST00000480562 CMC4P56277 68 aaPredicted RBP13.84□□□□□ -0.19
ABCF3-214ENST00000480562 LILRB2Q8N423 598 aa13.84□□□□□ -0.19
ABCF3-214ENST00000480562 PHLDA1Q8WV24 401 aaPredicted RBP13.84□□□□□ -0.19
ABCF3-214ENST00000480562 A0A0B4J293 547 aa13.83□□□□□ -0.2
ABCF3-214ENST00000480562 DUSP18Q8NEJ0 188 aa13.83□□□□□ -0.2
ABCF3-214ENST00000480562 TP53RKQ96S44 253 aa13.83□□□□□ -0.2
ABCF3-214ENST00000480562 RARRES2Q99969 163 aa13.83□□□□□ -0.2
ABCF3-214ENST00000480562 GINS3Q9BRX5 216 aa13.83□□□□□ -0.2
ABCF3-214ENST00000480562 KLK11Q9UBX7 282 aa13.83□□□□□ -0.2
ABCF3-214ENST00000480562 FAM25AB3EWG3 89 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 FAM25CB3EWG5 89 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 FAM25GB3EWG6 89 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 ST8SIA3O43173 380 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 SNCAP37840 140 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 NPBWR1P48145 328 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 AKR1C2P52895 323 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 PIGPP57054 158 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 RND3P61587 244 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 SLC35G3Q8N808 338 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 VSIRQ9H7M9 311 aa13.82□□□□□ -0.2
ABCF3-214ENST00000480562 PUS1Q9Y606 427 aaKnown RBP eCLIP13.82□□□□□ -0.2
ABCF3-214ENST00000480562 A0A1B0GU03 582 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 DFFBO76075 338 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 IFNA17P01571 189 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 P0C879 139 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 ETV6P41212 452 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 RORCP51449 518 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 PAFAH1B2P68402 229 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 RNASE10Q5GAN6 216 aaKnown RBP13.81□□□□□ -0.2
ABCF3-214ENST00000480562 LEMD1Q68G75 181 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 ZNF600Q6ZNG1 722 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 LHFPL1Q86WI0 220 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 RPP25LQ8N5L8 163 aaKnown RBP13.81□□□□□ -0.2
ABCF3-214ENST00000480562 OR11H2Q8NH07 326 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 OR52I2Q8NH67 350 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 GATAD1Q8WUU5 269 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 MS4A6AQ9H2W1 248 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 ZFAND3Q9H8U3 227 aa13.81□□□□□ -0.2
ABCF3-214ENST00000480562 DNASE2O00115 360 aaPredicted RBP13.8□□□□□ -0.2
ABCF3-214ENST00000480562 TMEM50AO95807 157 aa13.8□□□□□ -0.2
ABCF3-214ENST00000480562 CD3DP04234 171 aa13.8□□□□□ -0.2
ABCF3-214ENST00000480562 RNASE2P10153 161 aaKnown RBP13.8□□□□□ -0.2
ABCF3-214ENST00000480562 PPP5CP53041 499 aa13.8□□□□□ -0.2
ABCF3-214ENST00000480562 DEFB131AP59861 70 aa13.8□□□□□ -0.2
ABCF3-214ENST00000480562 NANOS2P60321 138 aaKnown RBP13.8□□□□□ -0.2
ABCF3-214ENST00000480562 RPL11P62913 178 aaKnown RBP13.8□□□□□ -0.2
ABCF3-214ENST00000480562 SP6Q3SY56 376 aa13.8□□□□□ -0.2
ABCF3-214ENST00000480562 FAM24BQ8N5W8 94 aa13.8□□□□□ -0.2
ABCF3-214ENST00000480562 ZNF486Q96H40 463 aaPredicted RBP13.8□□□□□ -0.2
ABCF3-214ENST00000480562 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
ABCF3-214ENST00000480562 DEDDO75618 318 aa13.79□□□□□ -0.2
ABCF3-214ENST00000480562 CA1P00915 261 aaPredicted RBP13.79□□□□□ -0.2
ABCF3-214ENST00000480562 PVRIGQ6DKI7 326 aa13.79□□□□□ -0.2
ABCF3-214ENST00000480562 MZT2AQ6P582 158 aa13.79□□□□□ -0.2
ABCF3-214ENST00000480562 MRPL36Q9P0J6 103 aaKnown RBP13.79□□□□□ -0.2
ABCF3-214ENST00000480562 FBXL17Q9UF56 701 aa13.79□□□□□ -0.2
ABCF3-214ENST00000480562 A0A0G2JRQ6 117 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 INS-IGF2F8WCM5 200 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 DEFB4AO15263 64 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 CD5P06127 495 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 HOXA1P49639 335 aaPredicted RBP13.78□□□□□ -0.2
ABCF3-214ENST00000480562 MLANAQ16655 118 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 TRIM16LQ309B1 348 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 ARRDC1Q8N5I2 433 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 OR4D10Q8NGI6 311 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 C11orf45Q8TAV5 145 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 PDCD10Q9BUL8 212 aa13.78□□□□□ -0.2
ABCF3-214ENST00000480562 NAA50Q9GZZ1 169 aaKnown RBP13.78□□□□□ -0.2
ABCF3-214ENST00000480562 FNDC4Q9H6D8 234 aaPredicted RBP13.78□□□□□ -0.2
ABCF3-214ENST00000480562 EXTL2Q9UBQ6 330 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms