RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 PRRT1Q99946 306 aa11.54□□□□□ -0.56
CDK9-203ENST00000480353 CHRDL1Q9BU40 450 aa11.54□□□□□ -0.56
CDK9-203ENST00000480353 WFDC10AQ9H1F0 79 aa11.54□□□□□ -0.56
CDK9-203ENST00000480353 IGHV3OR16-8A0A075B7F1 116 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 CTDSPLO15194 276 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 ST8SIA3O43173 380 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
CDK9-203ENST00000480353 SCGB2A1O75556 95 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 NPBWR1P48145 328 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 SURF2Q15527 256 aaPredicted RBP11.53□□□□□ -0.56
CDK9-203ENST00000480353 ZNF114Q8NC26 417 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 DUSP18Q8NEJ0 188 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 MCFD2Q8NI22 146 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 SCGB3A2Q96PL1 93 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 C5orf66Q9H5L9 145 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 MCUBQ9NWR8 336 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 SCP2D1Q9UJQ7 156 aa11.53□□□□□ -0.56
CDK9-203ENST00000480353 TENM3Q9P273 2699 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 FABP12A6NFH5 140 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 CORTO00230 105 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 IGKV1-5P01602 117 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 OR5AC1P0C628 307 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 C8orf88P0DMB2 117 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 UCP1P25874 307 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 BMI1P35226 326 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 DHODHQ02127 395 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 OR4C16Q8NGL9 310 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
CDK9-203ENST00000480353 NAA60Q9H7X0 242 aa11.52□□□□□ -0.57
CDK9-203ENST00000480353 C15orf62A8K5M9 175 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 I3L2K1 104 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 K7EMT4 169 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 IGHV3-48P01763 117 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 ETV6P41212 452 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 FAM219AQ8IW50 185 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 GINS3Q9BRX5 216 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 TMEM222Q9H0R3 208 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 RETNQ9HD89 108 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 KCNIP3Q9Y2W7 256 aa11.51□□□□□ -0.57
CDK9-203ENST00000480353 LOC102724200A0A096LPH7 203 aaPredicted RBP11.5□□□□□ -0.57
CDK9-203ENST00000480353 A0A0B4J293 547 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 RBMY1BA6NDE4 496 aaKnown RBP11.5□□□□□ -0.57
CDK9-203ENST00000480353 RBMY1EA6NEQ0 496 aaKnown RBP11.5□□□□□ -0.57
CDK9-203ENST00000480353 OR4C46A6NHA9 309 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 H3BMQ9 156 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 CTSGP08311 255 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 RBMY1DP0C7P1 496 aaKnown RBP11.5□□□□□ -0.57
CDK9-203ENST00000480353 FAUP35544 74 aaKnown RBP11.5□□□□□ -0.57
CDK9-203ENST00000480353 ZFAND6Q6FIF0 208 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 TMEM116Q8NCL8 245 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 OR51S1Q8NGJ8 323 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 RBPMSQ93062 196 aaKnown RBP11.5□□□□□ -0.57
CDK9-203ENST00000480353 FAM110AQ9BQ89 295 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 GGTLC1Q9BX51 225 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.5□□□□□ -0.57
CDK9-203ENST00000480353 UBQLN2Q9UHD9 624 aa11.5□□□□□ -0.57
CDK9-203ENST00000480353 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
CDK9-203ENST00000480353 TSPAN4O14817 238 aa11.49□□□□□ -0.57
CDK9-203ENST00000480353 GSTZ1O43708 216 aaPredicted RBP11.49□□□□□ -0.57
CDK9-203ENST00000480353 S100A5P33763 92 aa11.49□□□□□ -0.57
CDK9-203ENST00000480353 ADMP35318 185 aa11.49□□□□□ -0.57
CDK9-203ENST00000480353 OPRK1P41145 380 aa11.49□□□□□ -0.57
CDK9-203ENST00000480353 TMEM268Q5VZI3 342 aa11.49□□□□□ -0.57
CDK9-203ENST00000480353 RTBDNQ9BSG5 229 aaPredicted RBP11.49□□□□□ -0.57
CDK9-203ENST00000480353 HIPK2Q9H2X6 1198 aa11.49□□□□□ -0.57
CDK9-203ENST00000480353 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
CDK9-203ENST00000480353 IGHV3-49A0A0A0MS15 119 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 IGHV7-4-1A0A0J9YVY3 117 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 ANKRD20A5PA0PJZ0 165 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 CRYM-AS1A6NIL9 109 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 CEBPZOSA8MTT3 80 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 F8W735 103 aaPredicted RBP11.48□□□□□ -0.57
CDK9-203ENST00000480353 CDS2O95674 445 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 ANXA3P12429 323 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
CDK9-203ENST00000480353 TNFSF8P32971 234 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 AP3S2P59780 193 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 SPCS3P61009 180 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 PAFAH1B2P68402 229 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 PYDC2Q56P42 97 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 LINC00322Q6ZN03 302 aaPredicted RBP11.48□□□□□ -0.57
CDK9-203ENST00000480353 IL17DQ8TAD2 202 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 SLIRPQ9GZT3 109 aaKnown RBP11.48□□□□□ -0.57
CDK9-203ENST00000480353 NXF2Q9GZY0 626 aaKnown RBP11.48□□□□□ -0.57
CDK9-203ENST00000480353 HEYLQ9NQ87 328 aaPredicted RBP11.48□□□□□ -0.57
CDK9-203ENST00000480353 CACFD1Q9UGQ2 172 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 SMPXQ9UHP9 88 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 GPR132Q9UNW8 380 aa11.48□□□□□ -0.57
CDK9-203ENST00000480353 STAB2Q8WWQ8 2551 aa11.47□□□□□ -0.57
CDK9-203ENST00000480353 IGKV3-7A0A075B6H7 116 aa11.47□□□□□ -0.57
CDK9-203ENST00000480353 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
CDK9-203ENST00000480353 INS-IGF2F8WCM5 200 aa11.47□□□□□ -0.57
CDK9-203ENST00000480353 P0C879 139 aa11.47□□□□□ -0.57
CDK9-203ENST00000480353 AKR1C4P17516 323 aa11.47□□□□□ -0.57
CDK9-203ENST00000480353 APOC4P55056 127 aa11.47□□□□□ -0.57
CDK9-203ENST00000480353 ZNF600Q6ZNG1 722 aa11.47□□□□□ -0.57
CDK9-203ENST00000480353 SELENOHQ8IZQ5 122 aaKnown RBP11.47□□□□□ -0.57
CDK9-203ENST00000480353 GLYATL2Q8WU03 294 aa11.47□□□□□ -0.57
CDK9-203ENST00000480353 RHPN1-AS1Q9BWJ2 59 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms