RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 TMEM116Q8NCL8 245 aa6.52□□□□□ -1.37
XRCC6-208ENST00000478914 DUSP18Q8NEJ0 188 aa6.52□□□□□ -1.37
XRCC6-208ENST00000478914 RRNAD1Q96FB5 475 aaKnown RBP6.52□□□□□ -1.37
XRCC6-208ENST00000478914 GINS3Q9BRX5 216 aa6.52□□□□□ -1.37
XRCC6-208ENST00000478914 C6orf62Q9GZU0 229 aaPredicted RBP6.52□□□□□ -1.37
XRCC6-208ENST00000478914 C14orf166Q9Y224 244 aaKnown RBP6.52□□□□□ -1.37
XRCC6-208ENST00000478914 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
XRCC6-208ENST00000478914 HUWE1Q7Z6Z7 4374 aaKnown RBP6.51□□□□□ -1.37
XRCC6-208ENST00000478914 TRAV14DV4A0A0A6YYC5 116 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 IGHV7-4-1A0A0J9YVY3 117 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 F8W735 103 aaPredicted RBP6.51□□□□□ -1.37
XRCC6-208ENST00000478914 GABARAPH6UMI1 98 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 I3L2K1 104 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 CORTO00230 105 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 UBE2CO00762 179 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 B3GALNT1O75752 331 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 CTSDP07339 412 aaPredicted RBP6.51□□□□□ -1.37
XRCC6-208ENST00000478914 SMIM18P0DKX4 95 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 FCGR2BP31994 310 aaPredicted RBP6.51□□□□□ -1.37
XRCC6-208ENST00000478914 NPBWR1P48145 328 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 HOXA1P49639 335 aaPredicted RBP6.51□□□□□ -1.37
XRCC6-208ENST00000478914 CMC4P56277 68 aaPredicted RBP6.51□□□□□ -1.37
XRCC6-208ENST00000478914 PAFAH1B2P68402 229 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 MRPS10P82664 201 aaKnown RBP6.51□□□□□ -1.37
XRCC6-208ENST00000478914 SSBP1Q04837 148 aaKnown RBP6.51□□□□□ -1.37
XRCC6-208ENST00000478914 MEF2DQ14814 521 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 IZUMO4Q1ZYL8 232 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 SPINK9Q5DT21 86 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 STEAP1BQ6NZ63 245 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 LHFPL1Q86WI0 220 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 STPG3Q8N7X2 389 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 TERB2Q8NHR7 220 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 GALNT14Q96FL9 552 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 TP53RKQ96S44 253 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 ABHD1Q96SE0 405 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 OVOL2Q9BRP0 275 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 RHPN1-AS1Q9BWJ2 59 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 NXF2Q9GZY0 626 aaKnown RBP6.51□□□□□ -1.37
XRCC6-208ENST00000478914 SMPXQ9UHP9 88 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
XRCC6-208ENST00000478914 IGHV3-49A0A0A0MS15 119 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 KIR2DL5BA0A0G2JN68 375 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 KIR2DL5BA0A0G2JPC4 375 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 TEX13DA0A0J9YY54 714 aaPredicted RBP6.5□□□□□ -1.37
XRCC6-208ENST00000478914 DISC1C4P0D8 188 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 CHEK1O14757 476 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 ST8SIA3O43173 380 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 SPRY2O43597 315 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 NOL3O60936 208 aaKnown RBP6.5□□□□□ -1.37
XRCC6-208ENST00000478914 IGKV1-5P01602 117 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 IGHV3-48P01763 117 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 CD74P04233 296 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 CD5P06127 495 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 TFPI2P48307 235 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 ODF3L2Q3SX64 289 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 SP6Q3SY56 376 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 Q6ZWC4 215 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 KIR2DL5AQ8N109 375 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 OR13C8Q8NGS7 320 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 KIR2DL5BQ8NHK3 375 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 MARCH1Q8TCQ1 289 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 RNF2Q99496 336 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 RABL2AQ9UBK7 228 aaPredicted RBP6.5□□□□□ -1.37
XRCC6-208ENST00000478914 RABL2BQ9UNT1 228 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 TP53TG1Q9Y2A0 90 aa6.5□□□□□ -1.37
XRCC6-208ENST00000478914 IGKV3-7A0A075B6H7 116 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 DNASE2O00115 360 aaPredicted RBP6.49□□□□□ -1.37
XRCC6-208ENST00000478914 RPL35AP18077 110 aaKnown RBP6.49□□□□□ -1.37
XRCC6-208ENST00000478914 UCP1P25874 307 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 OPRK1P41145 380 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 ETV6P41212 452 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 IL18Q14116 193 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 DEFB135Q30KP9 77 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 ZNF600Q6ZNG1 722 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 CLVS1Q8IUQ0 354 aaPredicted RBP6.49□□□□□ -1.37
XRCC6-208ENST00000478914 FAM219AQ8IW50 185 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 OR4D10Q8NGI6 311 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 DIRAS2Q96HU8 199 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 NARS2Q96I59 477 aaKnown RBP6.49□□□□□ -1.37
XRCC6-208ENST00000478914 OR10C1Q96KK4 312 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 TMEM231Q9H6L2 316 aa6.49□□□□□ -1.37
XRCC6-208ENST00000478914 DNAH7Q8WXX0 4024 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 IGHV3OR16-13A0A075B7E8 117 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 IGHV3-74A0A0B4J1X5 117 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 A0A0B4J293 547 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 RPS10-NUDT3A0A1W2PQS6 291 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 CXorf65A6NEN9 183 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 INS-IGF2F8WCM5 200 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 CTDSP2O14595 271 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 OR5AC1P0C628 307 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 P0C879 139 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 AKAIN1P0CW23 69 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 RNASE2P10153 161 aaKnown RBP6.48□□□□□ -1.37
XRCC6-208ENST00000478914 ALDH3B2P48448 385 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 SPCS3P61009 180 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 RPL11P62913 178 aaKnown RBP6.48□□□□□ -1.37
XRCC6-208ENST00000478914 DHODHQ02127 395 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 SPCS2Q15005 226 aa6.48□□□□□ -1.37
XRCC6-208ENST00000478914 SURF2Q15527 256 aaPredicted RBP6.48□□□□□ -1.37
XRCC6-208ENST00000478914 FAAP20Q6NZ36 180 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms