RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 A8MU10 97 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 C9JCJ5 164 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 H7C1C5 153 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 PLA2G10O15496 165 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 MFSD11O43934 449 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 IGHG2P01859 326 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 SLC25A16P16260 332 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 PPIBP23284 216 aaKnown RBP2.64□□□□□ -1.99
VPS13D-207ENST00000476169 S100A7P31151 101 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 SERPINB10P48595 397 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 TPI1P60174 286 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 KRTAP10-6P60371 365 aaPredicted RBP2.64□□□□□ -1.99
VPS13D-207ENST00000476169 LCN6P62502 163 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 S100A12P80511 92 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF616Q08AN1 781 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 MRPL51Q4U2R6 128 aaKnown RBP2.64□□□□□ -1.99
VPS13D-207ENST00000476169 C9orf64Q5T6V5 341 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 DCUN1D2Q6PH85 259 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 WDR59Q6PJI9 974 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 RASL11AQ6T310 242 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 H1FOOQ8IZA3 346 aaPredicted RBP2.64□□□□□ -1.99
VPS13D-207ENST00000476169 ZFAND2AQ8N6M9 145 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 OR13C8Q8NGS7 320 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 TMEM70Q9BUB7 260 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 TMEM222Q9H0R3 208 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 LYRM2Q9NU23 88 aaPredicted RBP2.64□□□□□ -1.99
VPS13D-207ENST00000476169 LINC00588Q9Y4M8 146 aa2.64□□□□□ -1.99
VPS13D-207ENST00000476169 DDX60Q8IY21 1712 aaKnown RBP2.63□□□□□ -1.99
VPS13D-207ENST00000476169 IGKV6D-41A0A0C4DH26 115 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 MAP1LC3B2A6NCE7 125 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 A8MWP6 167 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 CLDN25C9JDP6 229 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 AIPO00170 330 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 LECT2O14960 151 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 BET1O15155 118 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF324O75467 553 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-207ENST00000476169 SRP19P09132 144 aaKnown RBP2.63□□□□□ -1.99
VPS13D-207ENST00000476169 DNAH10OSP0CZ25 163 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 MUC1P15941 1255 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-207ENST00000476169 CRYBB3P26998 211 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 ALDH3A1P30838 453 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 GLRXP35754 106 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 GABRA4P48169 554 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 TSPEAR-AS2P59090 65 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 IBA57Q5T440 356 aaKnown RBP2.63□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF880Q6PDB4 577 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 LYZL2Q7Z4W2 148 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 PHF13Q86YI8 300 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-207ENST00000476169 APCDD1LQ8NCL9 501 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 BPIFB6Q8NFQ5 453 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 OR13D1Q8NGV5 346 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 MRPL30Q8TCC3 161 aaKnown RBP2.63□□□□□ -1.99
VPS13D-207ENST00000476169 GPR146Q96CH1 333 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 MAP1LC3BQ9GZQ8 125 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 ANAPC11Q9NYG5 84 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 MCTS1Q9ULC4 181 aaKnown RBP2.63□□□□□ -1.99
VPS13D-207ENST00000476169 CYSLTR1Q9Y271 337 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 TIMM22Q9Y584 194 aa2.63□□□□□ -1.99
VPS13D-207ENST00000476169 AFDNP55196 1824 aaKnown RBP2.63□□□□□ -1.99
VPS13D-207ENST00000476169 ARFGEF2Q9Y6D5 1785 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 IGKV1OR2-108A0A075B7D4 117 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 IGSF23A1L1A6 192 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 DPRXA6NFQ7 191 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF98A6NK75 572 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 SLC17A3O00476 420 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 BANF1O75531 89 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF682O95780 498 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 NBEAP1P0C6P0 100 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 SPI1P17947 270 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 CSN1S1P47710 185 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 GABRA2P47869 451 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 RWDD2BP57060 319 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 KLF3P57682 345 aaPredicted RBP2.62□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF664Q8N3J9 261 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 EIF4E3Q8N5X7 224 aaKnown RBP2.62□□□□□ -1.99
VPS13D-207ENST00000476169 ST20-AS1Q8NBB2 130 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 TMEM35BQ8NCS4 154 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 SKA2Q8WVK7 121 aaPredicted RBP2.62□□□□□ -1.99
VPS13D-207ENST00000476169 MAFIPQ8WZ33 124 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 SH3BGRL3Q9H299 93 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 EFCAB1Q9HAE3 211 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 PARVBQ9HBI1 364 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 ACER3Q9NUN7 267 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 HSPB11Q9Y547 144 aa2.62□□□□□ -1.99
VPS13D-207ENST00000476169 ROBO3Q96MS0 1386 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 KIAA1671Q9BY89 1806 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 A0A1B0GVY2 172 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 A0A1B0GW54 56 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 A8MUU9 505 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 IFNA7P01567 189 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 C1QBP02746 253 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 NPPCP23582 126 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 RPL27AP46776 148 aaKnown RBP2.61□□□□□ -1.99
VPS13D-207ENST00000476169 SMCO1Q147U7 214 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 SPATA12Q7Z6I5 190 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF283Q8N7M2 679 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 FNDC9Q8TBE3 224 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 CD200R1Q8TD46 325 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 LZICQ8WZA0 190 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 RNASE6Q93091 150 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms