RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 FCN2Q15485 313 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 DEFB136Q30KP8 78 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 C2orf83Q53S99 150 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 ZNF343Q6P1L6 599 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 ETV3LQ6ZN32 361 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 WDR89Q96FK6 387 aaPredicted RBP8.16□□□□□ -1.1
SMC1A-206ENST00000470241 MGAT4CQ9UBM8 478 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 RCL1Q9Y2P8 373 aaKnown RBP8.16□□□□□ -1.1
SMC1A-206ENST00000470241 S4R3C0 116 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 IGHV3-21A0A0B4J1V1 117 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 C15orf62A8K5M9 175 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 K7EPK0 472 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 M0QZ24 198 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 WRBO00258 174 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 SSSCA1O60232 199 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 MT-CO2P00403 227 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 IFNA10P01566 189 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 TRBV12-3P01733 135 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 IGHV3-23P01764 117 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 NPY1RP25929 384 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 PAX9P55771 341 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 OR11H7Q8NGC8 314 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 ZNF502Q8TBZ5 544 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 VN1R17PQ8TDU5 208 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 SCARB1Q8WTV0 552 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 MISP3Q96FF7 219 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 RAX2Q96IS3 184 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 CCDC140Q96MF4 163 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 DUX3Q96PT4 197 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 CIB3Q96Q77 187 aaPredicted RBP8.15□□□□□ -1.1
SMC1A-206ENST00000470241 OR4C12Q96R67 309 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 NMES1Q9C002 83 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 MED28Q9H204 178 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 C11orf1Q9H5F2 150 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 THYN1Q9P016 225 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 U3KQ87 197 aa8.15□□□□□ -1.1
SMC1A-206ENST00000470241 IGHV4OR15-8A0A075B7B6 117 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 A0A087WW49 117 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.14□□□□□ -1.11
SMC1A-206ENST00000470241 F8W735 103 aaPredicted RBP8.14□□□□□ -1.11
SMC1A-206ENST00000470241 H3BP45 60 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 CCL24O00175 119 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 CORTO00230 105 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 LY86O95711 162 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 HSPB1P04792 205 aaKnown RBP8.14□□□□□ -1.11
SMC1A-206ENST00000470241 ATP5IP56385 69 aaPredicted RBP8.14□□□□□ -1.11
SMC1A-206ENST00000470241 RAB32Q13637 225 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 FHL3Q13643 280 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 OR11H1Q8NG94 326 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 OR4F17Q8NGA8 305 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 OR1N2Q8NGR9 330 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 EEF1AKMT3Q96AZ1 226 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 PINX1Q96BK5 328 aaKnown RBP8.14□□□□□ -1.11
SMC1A-206ENST00000470241 SMIM8Q96KF7 97 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 CXorf58Q96LI9 332 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 OR4F4Q96R69 305 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 RAB40CQ96S21 281 aa8.14□□□□□ -1.11
SMC1A-206ENST00000470241 FNDC4Q9H6D8 234 aaPredicted RBP8.14□□□□□ -1.11
SMC1A-206ENST00000470241 LSM5Q9Y4Y9 91 aaKnown RBP8.14□□□□□ -1.11
SMC1A-206ENST00000470241 TRBV7-1A0A0A6YYK4 115 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 ANKRD34BA5PLL1 514 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 IGHV3-48P01763 117 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 MYCNOSP40205 109 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 S100A10P60903 97 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 RRAS2P62070 204 aaPredicted RBP8.13□□□□□ -1.11
SMC1A-206ENST00000470241 CYCSP99999 105 aaKnown RBP8.13□□□□□ -1.11
SMC1A-206ENST00000470241 MLANAQ16655 118 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 SPANXN5Q5MJ07 72 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 Q6ZNX1 250 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 NOXA1Q86UR1 476 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 RNASEH2CQ8TDP1 164 aaKnown RBP8.13□□□□□ -1.11
SMC1A-206ENST00000470241 RANGRFQ9HD47 186 aaPredicted RBP8.13□□□□□ -1.11
SMC1A-206ENST00000470241 C21orf62Q9NYP8 219 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 PSENENQ9NZ42 101 aa8.13□□□□□ -1.11
SMC1A-206ENST00000470241 MRPL36Q9P0J6 103 aaKnown RBP8.13□□□□□ -1.11
SMC1A-206ENST00000470241 PEF1Q9UBV8 284 aaKnown RBP8.13□□□□□ -1.11
SMC1A-206ENST00000470241 TRRAPQ9Y4A5 3859 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 PMS2P5A8MQ11 134 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 PPP5D1E7EU14 171 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 LINC01619G3V211 115 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 H0YIZ8 118 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 BMPR1BO00238 502 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 TSC22D2O75157 780 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 FCGR2BP31994 310 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-206ENST00000470241 GPR183P32249 361 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 OPRK1P41145 380 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 TAS2R30P59541 319 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 RPP30P78346 268 aaKnown RBP8.12□□□□□ -1.11
SMC1A-206ENST00000470241 ZNF616Q08AN1 781 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 LRRC37A5PQ49AS3 106 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 TMEM14EPQ6UXP3 125 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 CLEC19AQ6UXS0 136 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 PPP1R1CQ8WVI7 109 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 DPF1Q92782 380 aa8.12□□□□□ -1.11
SMC1A-206ENST00000470241 STRAPQ9Y3F4 350 aaKnown RBP8.12□□□□□ -1.11
SMC1A-206ENST00000470241 PRSS46E5RG02 174 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 L7N2F9 121 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 DEDDO75618 318 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 CCNKO75909 580 aa8.11□□□□□ -1.11
SMC1A-206ENST00000470241 PF4P02776 101 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms