RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ZNF600Q6ZNG1 722 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 ZNF485Q8NCK3 441 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 MOB3AQ96BX8 217 aa7.12□□□□□ -1.27
HDAC3-203ENST00000467533 C7orf50Q9BRJ6 194 aaKnown RBP7.12□□□□□ -1.27
HDAC3-203ENST00000467533 I3L2K1 104 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 SLC17A2O00624 439 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 DENRO43583 198 aaKnown RBP7.11□□□□□ -1.27
HDAC3-203ENST00000467533 MT-CO2P00403 227 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 HPRT1P00492 218 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 FGF2P09038 288 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 NPPCP23582 126 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 EIF2B2P49770 351 aaKnown RBP7.11□□□□□ -1.27
HDAC3-203ENST00000467533 CLDN12P56749 244 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 ST3GAL4Q11206 333 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 RAB11BQ15907 218 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 POU2AF1Q16633 256 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 RRN3P1Q2M238 152 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 HSD17B12Q53GQ0 312 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 Q6ZS49 121 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 RNF141Q8WVD5 230 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 PINX1Q96BK5 328 aaKnown RBP7.11□□□□□ -1.27
HDAC3-203ENST00000467533 NARS2Q96I59 477 aaKnown RBP7.11□□□□□ -1.27
HDAC3-203ENST00000467533 METTL26Q96S19 204 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 DCSTAMPQ9H295 470 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 NDUFA4L2Q9NRX3 87 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 GOLT1BQ9Y3E0 138 aa7.11□□□□□ -1.27
HDAC3-203ENST00000467533 SULT1C2O00338 296 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 MFNGO00587 321 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 RBFOX2O43251 390 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDAC3-203ENST00000467533 WBP4O75554 376 aaKnown RBP7.1□□□□□ -1.27
HDAC3-203ENST00000467533 CD1AP06126 327 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 HLA-DRB4P13762 266 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 GADD45AP24522 165 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 ERVK-16P61578 105 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 SNRPD3P62318 126 aaKnown RBP7.1□□□□□ -1.27
HDAC3-203ENST00000467533 CATR1Q13166 79 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 OR1P1Q8NH06 330 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 TMEM80Q96HE8 168 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 TMEM56Q96MV1 263 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 OR51B2Q9Y5P1 312 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 HLA-DRB4X5D2U9 266 aa7.1□□□□□ -1.27
HDAC3-203ENST00000467533 A0A1B0GU03 582 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 LOC100130705A0A1B0GUX0 176 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 MYL12BO14950 172 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
HDAC3-203ENST00000467533 CTXN2P0C2S0 81 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 DNAH10OSP0CZ25 163 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 DEFB130BP0DP73 79 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 DEFB130AP0DP74 79 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 HIST1H1DP16402 221 aaKnown RBP7.09□□□□□ -1.27
HDAC3-203ENST00000467533 GCSHP23434 173 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 RNASE12Q5GAN4 147 aaKnown RBP7.09□□□□□ -1.27
HDAC3-203ENST00000467533 TMEM69Q5SWH9 247 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 Q6ZRN7 208 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-203ENST00000467533 OR10R2Q8NGX6 335 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 DEFB104AQ8WTQ1 72 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 SECTM1Q8WVN6 248 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 UHRF2Q96PU4 802 aa7.09□□□□□ -1.27
HDAC3-203ENST00000467533 TMEM272A0A1B0GTI8 110 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 EFCAB10A6NFE3 127 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 ERICH4A6NGS2 130 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 FAM90A26D6RGX4 464 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 EBAG9O00559 213 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 ATP5G1P05496 136 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 NPBWR1P48145 328 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 ATP5G3P48201 142 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 WNT4P56705 351 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 C2orf76Q3KRA6 126 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 C1orf146Q5VVC0 180 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 FAM3DQ96BQ1 224 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 SLC7A6OSQ96CW6 309 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-203ENST00000467533 GFI1Q99684 422 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 FNDC4Q9H6D8 234 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-203ENST00000467533 CCL28Q9NRJ3 127 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 NSG2Q9Y328 171 aa7.08□□□□□ -1.28
HDAC3-203ENST00000467533 AK6Q9Y3D8 172 aaKnown RBP7.08□□□□□ -1.28
HDAC3-203ENST00000467533 LYRM9A8MSI8 78 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 SNAPC5O75971 98 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 DTYMKP23919 212 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 CRYBB3P26998 211 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 HOXA1P49639 335 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-203ENST00000467533 PPP5CP53041 499 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 GDF5OSQ5U4N7 250 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 TPRA1Q86W33 373 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 MS4A15Q8N5U1 240 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 OR51H1Q8NH63 302 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 UPK3BQ9BT76 320 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 TMEM208Q9BTX3 173 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 MAGT1Q9H0U3 335 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 PLEKHA2Q9HB19 425 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 COMMD9Q9P000 198 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 RAB22AQ9UL26 194 aa7.07□□□□□ -1.28
HDAC3-203ENST00000467533 MARCH11A6NNE9 402 aa7.06□□□□□ -1.28
HDAC3-203ENST00000467533 ATP5HO75947 161 aa7.06□□□□□ -1.28
HDAC3-203ENST00000467533 AP2S1P53680 142 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-203ENST00000467533 CNIH2Q6PI25 160 aa7.06□□□□□ -1.28
HDAC3-203ENST00000467533 C1orf158Q8N1D5 194 aa7.06□□□□□ -1.28
HDAC3-203ENST00000467533 ZNF709Q8N972 641 aa7.06□□□□□ -1.28
HDAC3-203ENST00000467533 OR4B1Q8NGF8 309 aa7.06□□□□□ -1.28
HDAC3-203ENST00000467533 OR4C16Q8NGL9 310 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms