RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 GIG44P09565 113 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-209ENST00000463631 MIFP14174 115 aa12.55□□□□□ -0.4
HMGN1-209ENST00000463631 DEFB131AP59861 70 aa12.55□□□□□ -0.4
HMGN1-209ENST00000463631 MXD1Q05195 221 aa12.55□□□□□ -0.4
HMGN1-209ENST00000463631 LEMD1Q68G75 181 aa12.55□□□□□ -0.4
HMGN1-209ENST00000463631 TOMM20LQ6UXN7 152 aa12.55□□□□□ -0.4
HMGN1-209ENST00000463631 SPARTQ8N0X7 666 aa12.55□□□□□ -0.4
HMGN1-209ENST00000463631 ZNF2Q9BSG1 426 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-209ENST00000463631 FXYD6Q9H0Q3 95 aa12.55□□□□□ -0.4
HMGN1-209ENST00000463631 ZFAND3Q9H8U3 227 aa12.55□□□□□ -0.4
HMGN1-209ENST00000463631 IFT46Q9NQC8 304 aa12.55□□□□□ -0.4
HMGN1-209ENST00000463631 TRAV10A0A0B4J240 114 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 IGHV4-28A0A0C4DH34 117 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 ZNF705EA8MWA4 302 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-209ENST00000463631 GPR31O00270 319 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 ST8SIA3O43173 380 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 CLEC2LP0C7M8 214 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 RBMY1A1P0DJD3 496 aaKnown RBP12.54□□□□□ -0.4
HMGN1-209ENST00000463631 RBMY1CP0DJD4 496 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 MED14OSP0DP75 135 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 HLA-DMBP28068 263 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 RFX2P48378 723 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 PRCDQ00LT1 54 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 RBMY1FQ15415 496 aaKnown RBP12.54□□□□□ -0.4
HMGN1-209ENST00000463631 IDNKQ5T6J7 187 aa12.54□□□□□ -0.4
HMGN1-209ENST00000463631 TRPT1Q86TN4 253 aaKnown RBP12.54□□□□□ -0.4
HMGN1-209ENST00000463631 IGHV4-4A0A075B6R2 117 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 MEIS3P1A6NDR6 274 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 ANKRD65E5RJM6 399 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 DNASE2O00115 360 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-209ENST00000463631 XRCC3O43542 346 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 AMBPP02760 352 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 SPP1P10451 314 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 TAS2R46P59540 309 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 MORN3Q6PF18 240 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-209ENST00000463631 STHQ8IWL8 128 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 LILRB2Q8N423 598 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 FAM24BQ8N5W8 94 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 DUSP18Q8NEJ0 188 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 SEC22AQ96IW7 307 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 RNF126Q9BV68 326 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 RAB26Q9ULW5 256 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 AGRNO00468 2067 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 MUC4Q99102 2169 aa12.53□□□□□ -0.4
HMGN1-209ENST00000463631 IGHV3-48P01763 117 aa12.52□□□□□ -0.41
HMGN1-209ENST00000463631 APOHP02749 345 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-209ENST00000463631 NAT1P18440 290 aa12.52□□□□□ -0.41
HMGN1-209ENST00000463631 NPBWR1P48145 328 aa12.52□□□□□ -0.41
HMGN1-209ENST00000463631 ZNF600Q6ZNG1 722 aa12.52□□□□□ -0.41
HMGN1-209ENST00000463631 Q6ZTC4 211 aa12.52□□□□□ -0.41
HMGN1-209ENST00000463631 GRAMD2BQ96HH9 432 aa12.52□□□□□ -0.41
HMGN1-209ENST00000463631 TMEM231Q9H6L2 316 aa12.52□□□□□ -0.41
HMGN1-209ENST00000463631 X6R8D5 127 aa12.52□□□□□ -0.41
HMGN1-209ENST00000463631 DNAH11Q96DT5 4516 aa12.51□□□□□ -0.41
HMGN1-209ENST00000463631 C4BPBP20851 252 aa12.51□□□□□ -0.41
HMGN1-209ENST00000463631 PVRIGQ6DKI7 326 aa12.51□□□□□ -0.41
HMGN1-209ENST00000463631 OR5H2Q8NGV7 314 aa12.51□□□□□ -0.41
HMGN1-209ENST00000463631 PINX1Q96BK5 328 aaKnown RBP12.51□□□□□ -0.41
HMGN1-209ENST00000463631 RNF167Q9H6Y7 350 aa12.51□□□□□ -0.41
HMGN1-209ENST00000463631 PUS1Q9Y606 427 aaKnown RBP eCLIP12.51□□□□□ -0.41
HMGN1-209ENST00000463631 PKD1P98161 4303 aa12.5□□□□□ -0.41
HMGN1-209ENST00000463631 K7EQG2 157 aa12.5□□□□□ -0.41
HMGN1-209ENST00000463631 HSPE1P61604 102 aaKnown RBP12.5□□□□□ -0.41
HMGN1-209ENST00000463631 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
HMGN1-209ENST00000463631 OR6F1Q8NGZ6 308 aa12.5□□□□□ -0.41
HMGN1-209ENST00000463631 OR4A16Q8NH70 328 aa12.5□□□□□ -0.41
HMGN1-209ENST00000463631 ELOA3CA0A087WX78 387 aaPredicted RBP12.49□□□□□ -0.41
HMGN1-209ENST00000463631 A0A1B0GU03 582 aa12.49□□□□□ -0.41
HMGN1-209ENST00000463631 INS-IGF2F8WCM5 200 aa12.49□□□□□ -0.41
HMGN1-209ENST00000463631 IGKV1-39P01597 117 aa12.49□□□□□ -0.41
HMGN1-209ENST00000463631 PMP2P02689 132 aa12.49□□□□□ -0.41
HMGN1-209ENST00000463631 IGKV1D-39P04432 117 aa12.49□□□□□ -0.41
HMGN1-209ENST00000463631 S100GP29377 79 aa12.49□□□□□ -0.41
HMGN1-209ENST00000463631 RPL11P62913 178 aaKnown RBP12.49□□□□□ -0.41
HMGN1-209ENST00000463631 ERHP84090 104 aaKnown RBP12.49□□□□□ -0.41
HMGN1-209ENST00000463631 CENPSQ8N2Z9 138 aa12.49□□□□□ -0.41
HMGN1-209ENST00000463631 S100A16Q96FQ6 103 aaKnown RBP12.49□□□□□ -0.41
HMGN1-209ENST00000463631 RABAC1Q9UI14 185 aa12.49□□□□□ -0.41
HMGN1-209ENST00000463631 IGHV3-66A0A0C4DH42 116 aa12.48□□□□□ -0.41
HMGN1-209ENST00000463631 LOC100506127A0A0U1RQW1 187 aa12.48□□□□□ -0.41
HMGN1-209ENST00000463631 A0A1W2PS18 150 aa12.48□□□□□ -0.41
HMGN1-209ENST00000463631 PHLDA2Q53GA4 152 aa12.48□□□□□ -0.41
HMGN1-209ENST00000463631 UBE2NLQ5JXB2 153 aa12.48□□□□□ -0.41
HMGN1-209ENST00000463631 LPCAT3Q6P1A2 487 aa12.48□□□□□ -0.41
HMGN1-209ENST00000463631 POM121L12Q8N7R1 296 aa12.48□□□□□ -0.41
HMGN1-209ENST00000463631 CSNK1G2-AS1Q8NCQ2 148 aa12.48□□□□□ -0.41
HMGN1-209ENST00000463631 TBC1D24Q9ULP9 559 aa12.48□□□□□ -0.41
HMGN1-209ENST00000463631 TMEM50AO95807 157 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 P0DMU3 169 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 NPPCP23582 126 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 CRYBB3P26998 211 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 HRH1P35367 487 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 KCTD21Q4G0X4 260 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 TMEM69Q5SWH9 247 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 TBC1D26Q86UD7 250 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 CROCCP3Q8IVE0 287 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 STXBP6Q8NFX7 210 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 DCANP1Q8TF63 244 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms