RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 EHFQ9NZC4 300 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 MRPL27Q9P0M9 148 aaKnown RBP3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 HYDINQ4G0P3 5121 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 RYR2Q92736 4967 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 DNAH7Q8WXX0 4024 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 IGKV3-7A0A075B6H7 116 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 IGHV3OR16-13A0A075B7E8 117 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 IGHV3-74A0A0B4J1X5 117 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 A8MWP6 167 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 TGOLN2O43493 480 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 XRCC3O43542 346 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 SCGNO76038 276 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 LY6G6CO95867 125 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 RLN1P04808 185 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 SERPINE2P07093 398 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 TRAPPC2P0DI81 140 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 TRAPPC2BP0DI82 140 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 PTBP1P26599 531 aaKnown RBP eCLIP3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 HLA-DMAP28067 261 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 TFPI2P48307 235 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 TAS2R31P59538 309 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 TNFRSF9Q07011 255 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 CATR1Q13166 79 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 POU2AF1Q16633 256 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 KLK9Q2XQG4 91 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 DEFB135Q30KP9 77 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 ANKRD55Q3KP44 614 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 PHLDA2Q53GA4 152 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 APRG1Q8IVJ8 170 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 OR5B3Q8NH48 314 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 SCARB1Q8WTV0 552 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 FCGR1BQ92637 280 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 DGCR14Q96DF8 476 aaKnown RBP3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 S100A16Q96FQ6 103 aaKnown RBP3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 ZNF414Q96IQ9 312 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 QTRT1Q9BXR0 403 aaKnown RBP3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 YTHDF1Q9BYJ9 559 aaKnown RBP3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 ZNF436Q9C0F3 470 aaPredicted RBP3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 C5orf66Q9H5L9 145 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 IFT46Q9NQC8 304 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 NDUFA4L2Q9NRX3 87 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 KLK9Q9UKQ9 250 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 ETV7Q9Y603 341 aa3.47□□□□□ -1.85
GTF3C3-208ENST00000455546 TRAV25A0A0B4J276 109 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 K7EIM0 57 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 RBFOX2O43251 390 aaKnown RBP eCLIP3.46□□□□□ -1.867e-6■□□□□ 8.8
GTF3C3-208ENST00000455546 SNAPC5O75971 98 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 EIF4EP06730 217 aaKnown RBP3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 CTSDP07339 412 aaPredicted RBP3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 CTSGP08311 255 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 F2RP25116 425 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 FCGR2BP31994 310 aaPredicted RBP3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 HERV-K104P61576 105 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 ERVK-16P61578 105 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 VAMP2P63027 116 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 RPP30P78346 268 aaKnown RBP3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 MSMO1Q15800 293 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 IZUMO4Q1ZYL8 232 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 ODF3L2Q3SX64 289 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 Q56UQ5 140 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 SPINK9Q5DT21 86 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 TMEM69Q5SWH9 247 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 LYG2Q86SG7 212 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 SLC38A6Q8IZM9 456 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 GBGT1Q8N5D6 347 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 SAMD12Q8N8I0 201 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 GDPD1Q8N9F7 314 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 TSPAN14Q8NG11 270 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 OR1L8Q8NGR8 309 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 OR5H2Q8NGV7 314 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 OR6F1Q8NGZ6 308 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 CD300LFQ8TDQ1 290 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 VN1R17PQ8TDU5 208 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 SLC25A46Q96AG3 418 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 MOB3AQ96BX8 217 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 RNF2Q99496 336 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 Q9H521 79 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 AAMDCQ9H7C9 122 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 C21orf62Q9NYP8 219 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 THYN1Q9P016 225 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 UFC1Q9Y3C8 167 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 OR51B2Q9Y5P1 312 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 F11RQ9Y624 299 aaKnown RBP3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 DNAH1Q9P2D7 4330 aa3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 EPPK1P58107 5090 aaKnown RBP3.46□□□□□ -1.86
GTF3C3-208ENST00000455546 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 A0A0A6YYH2 397 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 IGHV3-66A0A0C4DH42 116 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 A6NJ64 397 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 GPR31O00270 319 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 NDUFA4O00483 81 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 CHEK1O14757 476 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 TSPAN4O14817 238 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 DEFB4AO15263 64 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 YIF1AO95070 293 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 IGKV1-39P01597 117 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 APOHP02749 345 aaPredicted RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 IGKV1D-39P04432 117 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 PRSS3P35030 304 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms