RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TMEM187Q14656 261 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 RGNQ15493 299 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 ANKRD55Q3KP44 614 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 LGALSLQ3ZCW2 172 aaPredicted RBP3.36□□□□□ -1.87
SDCBP-205ENST00000447267 GCNT6Q5T4J0 391 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 SAMD13Q5VXD3 122 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF57Q68EA5 555 aaPredicted RBP3.36□□□□□ -1.87
SDCBP-205ENST00000447267 SPSB3Q6PJ21 355 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 PRSS45Q7RTY3 260 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 FAM220AQ7Z4H9 259 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 FUNDC1Q8IVP5 155 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 C15orf54Q8N8G6 183 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 CSNK2A3Q8NEV1 391 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 OR1L6Q8NGR2 347 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 OR2G2Q8NGZ5 317 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 THAP6Q8TBB0 222 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 SPTSSAQ969W0 71 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 GALNT14Q96FL9 552 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 MBOAT4Q96T53 435 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 TSNAXQ99598 290 aaKnown RBP3.36□□□□□ -1.87
SDCBP-205ENST00000447267 MED20Q9H944 212 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF586Q9NXT0 402 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 TECRQ9NZ01 308 aaKnown RBP3.36□□□□□ -1.87
SDCBP-205ENST00000447267 RPL36Q9Y3U8 105 aaKnown RBP3.36□□□□□ -1.87
SDCBP-205ENST00000447267 LINC00588Q9Y4M8 146 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 AMMECR1Q9Y4X0 333 aaPredicted RBP3.36□□□□□ -1.87
SDCBP-205ENST00000447267 URGCP-MRPS24S4R325 110 aa3.36□□□□□ -1.87
SDCBP-205ENST00000447267 IGLV5-52A0A0A0MRZ9 124 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 TRBV2A0A0J9YWF9 115 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 A0A1B0GW64 132 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 PRORSD1PA6NEY8 169 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 NPIPB5A8MRT5 1133 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 ZNF732B4DXR9 585 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 J3QR06 171 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 K7EQM0 130 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 RFXANKO14593 260 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 HSD17B6O14756 317 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 MRASO14807 208 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 SIVA1O15304 175 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 SNAI2O43623 268 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 TXNDC12O95881 172 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 MOSP00540 346 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 CA1P00915 261 aaPredicted RBP3.35□□□□□ -1.87
SDCBP-205ENST00000447267 HLA-DRB1P01911 266 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 PMP2P02689 132 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 PRSS2P07478 247 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 CD14P08571 375 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 ABHD2P08910 425 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 ANXA3P12429 323 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 HOXB9P17482 250 aaPredicted RBP3.35□□□□□ -1.87
SDCBP-205ENST00000447267 NPY1RP25929 384 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 RPS27P42677 84 aaKnown RBP3.35□□□□□ -1.87
SDCBP-205ENST00000447267 LGALS7P47929 136 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 RPS20P60866 119 aaKnown RBP3.35□□□□□ -1.87
SDCBP-205ENST00000447267 ERVK11-1P61568 191 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 LSM3P62310 102 aaKnown RBP3.35□□□□□ -1.87
SDCBP-205ENST00000447267 RAB11AP62491 216 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 GNG3P63215 75 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 SCN1BQ07699 218 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 EIF2B1Q14232 305 aaKnown RBP3.35□□□□□ -1.87
SDCBP-205ENST00000447267 OPCMLQ14982 345 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 RAB11BQ15907 218 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 C17orf58Q2M2W7 97 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 CYBRD1Q53TN4 286 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 AKR1C8PQ5T2L2 129 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 AHSA2Q719I0 299 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 TCF24Q7RTU0 167 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 SERPINA12Q8IW75 414 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 ACBD7Q8N6N7 88 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 PXT1Q8NFP0 134 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 OR9G1Q8NH87 305 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 OR1S1Q8NH92 325 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 GPX8Q8TED1 209 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 TMEM239Q8WW34 195 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 BPIFA2Q96DR5 249 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 SMIM8Q96KF7 97 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 OR52E6Q96RD3 313 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 FAM103A1Q9BTL3 118 aaKnown RBP3.35□□□□□ -1.87
SDCBP-205ENST00000447267 FNDC11Q9BVV2 318 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 CHST6Q9GZX3 395 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 C20orf85Q9H1P6 137 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 GEMIN7Q9H840 131 aaKnown RBP3.35□□□□□ -1.87
SDCBP-205ENST00000447267 MRPL22Q9NWU5 206 aaKnown RBP3.35□□□□□ -1.87
SDCBP-205ENST00000447267 COMMD3Q9UBI1 195 aa3.35□□□□□ -1.87
SDCBP-205ENST00000447267 F6UZH7 168 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 F8VVB4 439 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 F8VWA3 439 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 H3BN98 237 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 J3QT63 122 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 XKRYO14609 159 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 CCL25O15444 150 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 LANCL1O43813 399 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 ORC5O43913 435 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 SNAPC5O75971 98 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 IGLV2-8P01709 118 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 RPA2P15927 270 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 CBLN1P23435 193 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 CRHBPP24387 322 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 AMTP48728 403 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms