RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 PMS2P5A8MQ11 134 aa12.53□□□□□ -0.4
MCF2L-217ENST00000441756 EGR2P11161 476 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-217ENST00000441756 TPT1P13693 172 aaKnown RBP12.53□□□□□ -0.4
MCF2L-217ENST00000441756 GPX4P36969 197 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-217ENST00000441756 PVRIGQ6DKI7 326 aa12.53□□□□□ -0.4
MCF2L-217ENST00000441756 Q71RC1 249 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-217ENST00000441756 HAPLN4Q86UW8 402 aa12.53□□□□□ -0.4
MCF2L-217ENST00000441756 TMEM170AQ8WVE7 144 aa12.53□□□□□ -0.4
MCF2L-217ENST00000441756 CACNG8Q8WXS5 425 aa12.53□□□□□ -0.4
MCF2L-217ENST00000441756 MISP3Q96FF7 219 aa12.53□□□□□ -0.4
MCF2L-217ENST00000441756 WNT10AQ9GZT5 417 aa12.53□□□□□ -0.4
MCF2L-217ENST00000441756 BOLA1Q9Y3E2 137 aa12.53□□□□□ -0.4
MCF2L-217ENST00000441756 HIVEP2P31629 2446 aa12.53□□□□□ -0.4
MCF2L-217ENST00000441756 ACANP16112 2415 aa12.52□□□□□ -0.4
MCF2L-217ENST00000441756 PRSS46E5RG02 174 aa12.52□□□□□ -0.41
MCF2L-217ENST00000441756 CRLF1O75462 422 aa12.52□□□□□ -0.41
MCF2L-217ENST00000441756 CRYBA1P05813 215 aa12.52□□□□□ -0.41
MCF2L-217ENST00000441756 RNASE1P07998 156 aaKnown RBP12.52□□□□□ -0.41
MCF2L-217ENST00000441756 OPRK1P41145 380 aa12.52□□□□□ -0.41
MCF2L-217ENST00000441756 BLCAPP62952 87 aa12.52□□□□□ -0.41
MCF2L-217ENST00000441756 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
MCF2L-217ENST00000441756 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
MCF2L-217ENST00000441756 STOML3Q8TAV4 291 aa12.52□□□□□ -0.41
MCF2L-217ENST00000441756 SLC35E1Q96K37 410 aa12.52□□□□□ -0.41
MCF2L-217ENST00000441756 PARD6GQ9BYG4 376 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-217ENST00000441756 TLN2Q9Y4G6 2542 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 SMCO3A2RU48 225 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 H3BUA1 57 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 CD69Q07108 199 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 ARL16Q0P5N6 197 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 VWC2Q2TAL6 325 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 RPL7L1Q6DKI1 246 aaKnown RBP12.51□□□□□ -0.41
MCF2L-217ENST00000441756 EIF5AL1Q6IS14 154 aaKnown RBP12.51□□□□□ -0.41
MCF2L-217ENST00000441756 SLC16A13Q7RTY0 426 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-217ENST00000441756 DUX5Q96PT3 197 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 SLA2Q9H6Q3 261 aa12.51□□□□□ -0.41
MCF2L-217ENST00000441756 UBE2L5PA0A1B0GUS4 154 aa12.5□□□□□ -0.41
MCF2L-217ENST00000441756 MPDU1O75352 247 aa12.5□□□□□ -0.41
MCF2L-217ENST00000441756 AKR1C1Q04828 323 aa12.5□□□□□ -0.41
MCF2L-217ENST00000441756 C19orf54Q5BKX5 351 aa12.5□□□□□ -0.41
MCF2L-217ENST00000441756 Q8N2B8 174 aa12.5□□□□□ -0.41
MCF2L-217ENST00000441756 ZNF702PQ9H963 129 aa12.5□□□□□ -0.41
MCF2L-217ENST00000441756 NPVFQ9HCQ7 196 aa12.5□□□□□ -0.41
MCF2L-217ENST00000441756 CYTL1Q9NRR1 136 aa12.5□□□□□ -0.41
MCF2L-217ENST00000441756 IGLV11-55A0A075B6I3 123 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 LINC01548A6NM66 108 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 TCF21O43680 179 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 SCGB2A1O75556 95 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 BRI3O95415 125 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 SLC35B1P78383 322 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 RAB31Q13636 194 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 KLK9Q2XQG4 91 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 BAP18Q8IXM2 172 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 OR5T1Q8NG75 326 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 OR2T6Q8NHC8 308 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 ST8SIA2Q92186 375 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 GNPNAT1Q96EK6 184 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-217ENST00000441756 PHYHIPLQ96FC7 376 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 WFDC1Q9HC57 220 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 ESM1Q9NQ30 184 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 ZNF355PQ9NSJ1 428 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 KLK9Q9UKQ9 250 aa12.49□□□□□ -0.41
MCF2L-217ENST00000441756 FAM181BA6NEQ2 426 aa12.48□□□□□ -0.41
MCF2L-217ENST00000441756 G3V318 75 aa12.48□□□□□ -0.41
MCF2L-217ENST00000441756 MFAP2P55001 183 aa12.48□□□□□ -0.41
MCF2L-217ENST00000441756 ZNF709Q8N972 641 aa12.48□□□□□ -0.41
MCF2L-217ENST00000441756 WDR61Q9GZS3 305 aaKnown RBP12.48□□□□□ -0.41
MCF2L-217ENST00000441756 ZNF469Q96JG9 3925 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-217ENST00000441756 TMEM89A2RUT3 159 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 FAM223BA6NKX1 122 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 C17orf112F2Z3M2 114 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 MT-CO2P00403 227 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 IFNA7P01567 189 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 FGF7P21781 194 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 TEPPQ6URK8 271 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 C19orf35Q6ZS72 473 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 TMEM144Q7Z5S9 345 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 FAM223AQ8IWN6 122 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 NECAP1Q8NC96 275 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 CXorf58Q96LI9 332 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 FANCD2OSQ96PS1 177 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 GINS3Q9BRX5 216 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 ARV1Q9H2C2 271 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 WDR83OSQ9Y284 106 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 PLXNB1O43157 2135 aa12.47□□□□□ -0.41
MCF2L-217ENST00000441756 SONP18583 2426 aaKnown RBP12.47□□□□□ -0.41
MCF2L-217ENST00000441756 I3L2K1 104 aa12.46□□□□□ -0.41
MCF2L-217ENST00000441756 SOX15O60248 233 aa12.46□□□□□ -0.41
MCF2L-217ENST00000441756 PPIFP30405 207 aaKnown RBP12.46□□□□□ -0.41
MCF2L-217ENST00000441756 GAMTQ14353 236 aa12.46□□□□□ -0.41
MCF2L-217ENST00000441756 ACSM6Q6P461 480 aa12.46□□□□□ -0.41
MCF2L-217ENST00000441756 BTNL8Q6UX41 500 aa12.46□□□□□ -0.41
MCF2L-217ENST00000441756 Q6ZS46 218 aa12.46□□□□□ -0.41
MCF2L-217ENST00000441756 HSD17B11Q8NBQ5 300 aa12.46□□□□□ -0.41
MCF2L-217ENST00000441756 VN1R17PQ8TDU5 208 aa12.46□□□□□ -0.41
MCF2L-217ENST00000441756 TAF15Q92804 592 aaKnown RBP eCLIP12.46□□□□□ -0.41
MCF2L-217ENST00000441756 ACY3Q96HD9 319 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms