RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 HERC2O95714 4834 aa13.34□□□□□ -0.27
GTF3A-204ENST00000438571 M0QYG6 137 aa13.33□□□□□ -0.28
GTF3A-204ENST00000438571 H2BFWTQ7Z2G1 175 aa13.33□□□□□ -0.28
GTF3A-204ENST00000438571 FAM24BQ8N5W8 94 aa13.33□□□□□ -0.28
GTF3A-204ENST00000438571 OR4A16Q8NH70 328 aa13.33□□□□□ -0.28
GTF3A-204ENST00000438571 ST8SIA2Q92186 375 aa13.33□□□□□ -0.28
GTF3A-204ENST00000438571 IGHV3-66A0A0C4DH42 116 aa13.32□□□□□ -0.28
GTF3A-204ENST00000438571 ATF4P18848 351 aaPredicted RBP13.32□□□□□ -0.28
GTF3A-204ENST00000438571 PI3P19957 117 aa13.32□□□□□ -0.28
GTF3A-204ENST00000438571 TOMM20LQ6UXN7 152 aa13.32□□□□□ -0.28
GTF3A-204ENST00000438571 CSTL1Q9H114 145 aa13.32□□□□□ -0.28
GTF3A-204ENST00000438571 ZFAND3Q9H8U3 227 aa13.32□□□□□ -0.28
GTF3A-204ENST00000438571 FAM212BQ9NTI7 297 aaPredicted RBP13.32□□□□□ -0.28
GTF3A-204ENST00000438571 HECTD4Q9Y4D8 3996 aa13.32□□□□□ -0.28
GTF3A-204ENST00000438571 TRAV14DV4A0A0A6YYC5 116 aa13.31□□□□□ -0.28
GTF3A-204ENST00000438571 GNG7O60262 68 aa13.31□□□□□ -0.28
GTF3A-204ENST00000438571 HPGDSO60760 199 aa13.31□□□□□ -0.28
GTF3A-204ENST00000438571 IGKV1-5P01602 117 aa13.31□□□□□ -0.28
GTF3A-204ENST00000438571 RCVRNP35243 200 aa13.31□□□□□ -0.28
GTF3A-204ENST00000438571 NANOS2P60321 138 aaKnown RBP13.31□□□□□ -0.28
GTF3A-204ENST00000438571 TCF24Q7RTU0 167 aa13.31□□□□□ -0.28
GTF3A-204ENST00000438571 MRPL36Q9P0J6 103 aaKnown RBP13.31□□□□□ -0.28
GTF3A-204ENST00000438571 KLK5Q9Y337 293 aaPredicted RBP13.31□□□□□ -0.28
GTF3A-204ENST00000438571 DEFB4AO15263 64 aa13.3□□□□□ -0.28
GTF3A-204ENST00000438571 ELK1P19419 428 aa13.3□□□□□ -0.28
GTF3A-204ENST00000438571 UCP3P55916 312 aa13.3□□□□□ -0.28
GTF3A-204ENST00000438571 HSPE1P61604 102 aaKnown RBP13.3□□□□□ -0.28
GTF3A-204ENST00000438571 VBP1P61758 197 aa13.3□□□□□ -0.28
GTF3A-204ENST00000438571 LEMD1Q68G75 181 aa13.3□□□□□ -0.28
GTF3A-204ENST00000438571 TP53RKQ96S44 253 aa13.3□□□□□ -0.28
GTF3A-204ENST00000438571 TXN2Q99757 166 aa13.3□□□□□ -0.28
GTF3A-204ENST00000438571 RARRES2Q99969 163 aa13.3□□□□□ -0.28
GTF3A-204ENST00000438571 A0A1B0GU03 582 aa13.29□□□□□ -0.28
GTF3A-204ENST00000438571 MPTX1A8MV57 137 aa13.29□□□□□ -0.28
GTF3A-204ENST00000438571 APOA1P02647 267 aa13.29□□□□□ -0.28
GTF3A-204ENST00000438571 P0C879 139 aa13.29□□□□□ -0.28
GTF3A-204ENST00000438571 LPCAT3Q6P1A2 487 aa13.29□□□□□ -0.28
GTF3A-204ENST00000438571 C6orf62Q9GZU0 229 aaPredicted RBP13.29□□□□□ -0.28
GTF3A-204ENST00000438571 VSIRQ9H7M9 311 aa13.29□□□□□ -0.28
GTF3A-204ENST00000438571 SCPEP1Q9HB40 452 aa13.29□□□□□ -0.28
GTF3A-204ENST00000438571 PUS1Q9Y606 427 aaKnown RBP eCLIP13.29□□□□□ -0.28
GTF3A-204ENST00000438571 A0A087WXM4 84 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 A0A0G2JRQ6 117 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 ST8SIA3O43173 380 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 DFFBO76075 338 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 CA1P00915 261 aaPredicted RBP13.28□□□□□ -0.28
GTF3A-204ENST00000438571 S100GP29377 79 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 DEFB131AP59861 70 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 LHFPL1Q86WI0 220 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 TMEM217Q8N7C4 229 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 OR11H2Q8NH07 326 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 FUNDC2Q9BWH2 189 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 MS4A6AQ9H2W1 248 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 FBXL17Q9UF56 701 aa13.28□□□□□ -0.28
GTF3A-204ENST00000438571 A0A0B4J293 547 aa13.27□□□□□ -0.29
GTF3A-204ENST00000438571 RNASE2P10153 161 aaKnown RBP13.27□□□□□ -0.29
GTF3A-204ENST00000438571 PGAM2P15259 253 aa13.27□□□□□ -0.29
GTF3A-204ENST00000438571 PPP5CP53041 499 aa13.27□□□□□ -0.29
GTF3A-204ENST00000438571 RND3P61587 244 aa13.27□□□□□ -0.29
GTF3A-204ENST00000438571 ERHP84090 104 aaKnown RBP13.27□□□□□ -0.29
GTF3A-204ENST00000438571 MLANAQ16655 118 aa13.27□□□□□ -0.29
GTF3A-204ENST00000438571 GATAD1Q8WUU5 269 aa13.27□□□□□ -0.29
GTF3A-204ENST00000438571 CMTM3Q96MX0 182 aa13.27□□□□□ -0.29
GTF3A-204ENST00000438571 FNDC4Q9H6D8 234 aaPredicted RBP13.27□□□□□ -0.29
GTF3A-204ENST00000438571 KLK11Q9UBX7 282 aa13.27□□□□□ -0.29
GTF3A-204ENST00000438571 PIGPP57054 158 aa13.26□□□□□ -0.29
GTF3A-204ENST00000438571 ZNF600Q6ZNG1 722 aa13.26□□□□□ -0.29
GTF3A-204ENST00000438571 SLC35G3Q8N808 338 aa13.26□□□□□ -0.29
GTF3A-204ENST00000438571 GINS3Q9BRX5 216 aa13.26□□□□□ -0.29
GTF3A-204ENST00000438571 KRTAP17-1Q9BYP8 105 aa13.26□□□□□ -0.29
GTF3A-204ENST00000438571 C11orf68Q9H3H3 251 aaKnown RBP13.26□□□□□ -0.29
GTF3A-204ENST00000438571 SMIM31A0A1B0GVY4 71 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 TMEM50AO95807 157 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 AKR1C2P52895 323 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 PRR20EP86478 221 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 PRR20CP86479 221 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 PRR20DP86480 221 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 PRR20BP86481 221 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 PRR20AP86496 221 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 SP6Q3SY56 376 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 LGALS9CQ6DKI2 356 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 PVRIGQ6DKI7 326 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 DUSP18Q8NEJ0 188 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 OR4D10Q8NGI6 311 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 C11orf45Q8TAV5 145 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 NAA50Q9GZZ1 169 aaKnown RBP13.25□□□□□ -0.29
GTF3A-204ENST00000438571 VCX3AQ9NNX9 186 aa13.25□□□□□ -0.29
GTF3A-204ENST00000438571 CD3DP04234 171 aa13.24□□□□□ -0.29
GTF3A-204ENST00000438571 ETV6P41212 452 aa13.24□□□□□ -0.29
GTF3A-204ENST00000438571 NPBWR1P48145 328 aa13.24□□□□□ -0.29
GTF3A-204ENST00000438571 CMC4P56277 68 aaPredicted RBP13.24□□□□□ -0.29
GTF3A-204ENST00000438571 RBMS2Q15434 407 aaKnown RBP13.24□□□□□ -0.29
GTF3A-204ENST00000438571 OR52I2Q8NH67 350 aa13.24□□□□□ -0.29
GTF3A-204ENST00000438571 RABAC1Q9UI14 185 aa13.24□□□□□ -0.29
GTF3A-204ENST00000438571 FAM25AB3EWG3 89 aa13.23□□□□□ -0.29
GTF3A-204ENST00000438571 FAM25CB3EWG5 89 aa13.23□□□□□ -0.29
GTF3A-204ENST00000438571 FAM25GB3EWG6 89 aa13.23□□□□□ -0.29
GTF3A-204ENST00000438571 INS-IGF2F8WCM5 200 aa13.23□□□□□ -0.29
GTF3A-204ENST00000438571 DNASE2O00115 360 aaPredicted RBP13.23□□□□□ -0.29
GTF3A-204ENST00000438571 TNFAIP8O95379 198 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms