RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 RNF126Q9BV68 326 aa11.45□□□□□ -0.58
SNCA-205ENST00000394991 ELOA3CA0A087WX78 387 aaPredicted RBP11.44□□□□□ -0.58
SNCA-205ENST00000394991 FAM25AB3EWG3 89 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 FAM25CB3EWG5 89 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 FAM25GB3EWG6 89 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 HPGDSO60760 199 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 APOA1P02647 267 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 AMBPP02760 352 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 ELK1P19419 428 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 PRSS3P35030 304 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 FXYD4P59646 89 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 TCF24Q7RTU0 167 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 HSD17B13Q7Z5P4 300 aaPredicted RBP11.44□□□□□ -0.58
SNCA-205ENST00000394991 CLVS1Q8IUQ0 354 aaPredicted RBP11.44□□□□□ -0.58
SNCA-205ENST00000394991 POM121L12Q8N7R1 296 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 DMBX1Q8NFW5 382 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 OR5AP2Q8NGF4 316 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 OR1L8Q8NGR8 309 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 CMTM3Q96MX0 182 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 SCRT1Q9BWW7 348 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 NDUFA4L2Q9NRX3 87 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 X6R8D5 127 aa11.44□□□□□ -0.58
SNCA-205ENST00000394991 YIF1AO95070 293 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 PPYP01298 95 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 PMP2P02689 132 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 ZNF182P17025 639 aaPredicted RBP11.43□□□□□ -0.58
SNCA-205ENST00000394991 CATR1Q13166 79 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 SNX29P2Q8IUI4 249 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 LILRB2Q8N423 598 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 ZBTB34Q8NCN2 500 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 OR51H1Q8NH63 302 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 AP3S1Q92572 193 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 LSM10Q969L4 123 aaKnown RBP11.43□□□□□ -0.58
SNCA-205ENST00000394991 DGCR14Q96DF8 476 aaKnown RBP11.43□□□□□ -0.58
SNCA-205ENST00000394991 HINT2Q9BX68 163 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 SLC5A7Q9GZV3 580 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 PLEKHA2Q9HB19 425 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 EHFQ9NZC4 300 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 CELA1Q9UNI1 258 aa11.43□□□□□ -0.58
SNCA-205ENST00000394991 TRAV14DV4A0A0A6YYC5 116 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 ZNF705EA8MWA4 302 aaPredicted RBP11.42□□□□□ -0.58
SNCA-205ENST00000394991 MIFP14174 115 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 C4BPBP20851 252 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 RELQ04864 619 aaPredicted RBP11.42□□□□□ -0.58
SNCA-205ENST00000394991 ZNF818PQ6ZRF7 136 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 ZNF767PQ75MW2 155 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 OR5H2Q8NGV7 314 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 GIMAP1Q8WWP7 306 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 ST8SIA2Q92186 375 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 MS4A6AQ9H2W1 248 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 NSG2Q9Y328 171 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 NACAE9PAV3 2078 aa11.42□□□□□ -0.58
SNCA-205ENST00000394991 DFFBO76075 338 aa11.41□□□□□ -0.58
SNCA-205ENST00000394991 APOHP02749 345 aaPredicted RBP11.41□□□□□ -0.58
SNCA-205ENST00000394991 RFX2P48378 723 aa11.41□□□□□ -0.58
SNCA-205ENST00000394991 TAS2R46P59540 309 aa11.41□□□□□ -0.58
SNCA-205ENST00000394991 HERV-K104P61576 105 aa11.41□□□□□ -0.58
SNCA-205ENST00000394991 PAFAH1B2P68402 229 aa11.41□□□□□ -0.58
SNCA-205ENST00000394991 SPCS2Q15005 226 aa11.41□□□□□ -0.58
SNCA-205ENST00000394991 LGALS9BQ3B8N2 356 aa11.41□□□□□ -0.58
SNCA-205ENST00000394991 TRPT1Q86TN4 253 aaKnown RBP11.41□□□□□ -0.58
SNCA-205ENST00000394991 TMEM17Q86X19 198 aa11.41□□□□□ -0.58
SNCA-205ENST00000394991 NXF2Q9GZY0 626 aaKnown RBP11.41□□□□□ -0.58
SNCA-205ENST00000394991 VSIRQ9H7M9 311 aa11.41□□□□□ -0.58
SNCA-205ENST00000394991 DEFB131BA0A096LNP1 70 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 MARCH11A6NNE9 402 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 I3L2K1 104 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 IGHV3-48P01763 117 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 P0DMU3 169 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 FAM231AP0DMU4 169 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 FAM231CP0DMU5 169 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 HLA-DMAP28067 261 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 C12orf74Q32Q52 190 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 RNASE12Q5GAN4 147 aaKnown RBP11.4□□□□□ -0.58
SNCA-205ENST00000394991 AADACL3Q5VUY0 350 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 STHQ8IWL8 128 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 GPX8Q8TED1 209 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 ZNF2Q9BSG1 426 aaPredicted RBP11.4□□□□□ -0.58
SNCA-205ENST00000394991 KRTAP3-3Q9BYR6 98 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 KRTAP3-2Q9BYR7 98 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 ANAPC10Q9UM13 185 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
SNCA-205ENST00000394991 TRAV2A0A0B4J234 112 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 IGHV3-66A0A0C4DH42 116 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 DBX1A6NMT0 343 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 DNASE2O00115 360 aaPredicted RBP11.39□□□□□ -0.59
SNCA-205ENST00000394991 ST8SIA3O43173 380 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 NOL3O60936 208 aaKnown RBP11.39□□□□□ -0.59
SNCA-205ENST00000394991 NAT1P18440 290 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 RPL5P46777 297 aaKnown RBP11.39□□□□□ -0.59
SNCA-205ENST00000394991 ERVK-16P61578 105 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 LYSMD2Q8IV50 215 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 OR1P1Q8NH06 330 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 RAB2BQ8WUD1 216 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 SCPEP1Q9HB40 452 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 EXTL2Q9UBQ6 330 aa11.39□□□□□ -0.59
SNCA-205ENST00000394991 RGS5O15539 181 aa11.38□□□□□ -0.59
SNCA-205ENST00000394991 HRH1P35367 487 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms