RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 HINT2Q9BX68 163 aa11.57□□□□□ -0.56
DDX55-202ENST00000354291 F11RQ9Y624 299 aaKnown RBP11.57□□□□□ -0.56
DDX55-202ENST00000354291 OR4C46A6NHA9 309 aa11.56□□□□□ -0.56
DDX55-202ENST00000354291 TGOLN2O43493 480 aa11.56□□□□□ -0.56
DDX55-202ENST00000354291 ELK1P19419 428 aa11.56□□□□□ -0.56
DDX55-202ENST00000354291 UCP3P55916 312 aa11.56□□□□□ -0.56
DDX55-202ENST00000354291 PHLDA2Q53GA4 152 aa11.56□□□□□ -0.56
DDX55-202ENST00000354291 MZT2AQ6P582 158 aa11.56□□□□□ -0.56
DDX55-202ENST00000354291 SPSB3Q6PJ21 355 aa11.56□□□□□ -0.56
DDX55-202ENST00000354291 BSCL2Q96G97 398 aaPredicted RBP11.56□□□□□ -0.56
DDX55-202ENST00000354291 ZNF436Q9C0F3 470 aaPredicted RBP11.56□□□□□ -0.56
DDX55-202ENST00000354291 NSG2Q9Y328 171 aa11.56□□□□□ -0.56
DDX55-202ENST00000354291 HPGDSO60760 199 aa11.55□□□□□ -0.56
DDX55-202ENST00000354291 HLA-DMBP28068 263 aa11.55□□□□□ -0.56
DDX55-202ENST00000354291 ADMP35318 185 aa11.55□□□□□ -0.56
DDX55-202ENST00000354291 PVRIGQ6DKI7 326 aa11.55□□□□□ -0.56
DDX55-202ENST00000354291 TBC1D26Q86UD7 250 aa11.55□□□□□ -0.56
DDX55-202ENST00000354291 CENPSQ8N2Z9 138 aa11.55□□□□□ -0.56
DDX55-202ENST00000354291 TMEM14BQ9NUH8 114 aa11.55□□□□□ -0.56
DDX55-202ENST00000354291 TRAV10A0A0B4J240 114 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 OR2T8A6NH00 312 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 FAM25AB3EWG3 89 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 FAM25CB3EWG5 89 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 FAM25GB3EWG6 89 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 LGALS9BQ3B8N2 356 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 Q6ZTC4 211 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 H2BFWTQ7Z2G1 175 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 SCARB1Q8WTV0 552 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 AP3S1Q92572 193 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 SEC22AQ96IW7 307 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 C21orf62Q9NYP8 219 aa11.54□□□□□ -0.56
DDX55-202ENST00000354291 IGLV2-18A0A075B6J9 118 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 C15orf61A6NNL5 157 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 NDUFA4O00483 81 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 CA1P00915 261 aaPredicted RBP11.53□□□□□ -0.56
DDX55-202ENST00000354291 P0DMU3 169 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 FAM231AP0DMU4 169 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 FAM231CP0DMU5 169 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 TMEM187Q14656 261 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 OR1P1Q8NH06 330 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 OR4A16Q8NH70 328 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 TMEM190Q8WZ59 177 aa11.53□□□□□ -0.56
DDX55-202ENST00000354291 DAZ1Q9NQZ3 744 aaKnown RBP11.53□□□□□ -0.56
DDX55-202ENST00000354291 C16orf90A8MZG2 172 aa11.52□□□□□ -0.57
DDX55-202ENST00000354291 CDK2AP2O75956 126 aa11.52□□□□□ -0.57
DDX55-202ENST00000354291 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.57
DDX55-202ENST00000354291 ZNF182P17025 639 aaPredicted RBP11.52□□□□□ -0.57
DDX55-202ENST00000354291 TFPI2P48307 235 aa11.52□□□□□ -0.57
DDX55-202ENST00000354291 C15orf40Q8WUR7 153 aa11.52□□□□□ -0.57
DDX55-202ENST00000354291 ZNF486Q96H40 463 aaPredicted RBP11.52□□□□□ -0.57
DDX55-202ENST00000354291 RNF126Q9BV68 326 aa11.52□□□□□ -0.57
DDX55-202ENST00000354291 HRH4Q9H3N8 390 aa11.52□□□□□ -0.57
DDX55-202ENST00000354291 APOBP04114 4563 aaKnown RBP11.51□□□□□ -0.57
DDX55-202ENST00000354291 IGHV3-21A0A0B4J1V1 117 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 DBX1A6NMT0 343 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 K7EIM0 57 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 K7EMT4 169 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 M0QYG6 137 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 GABARAPO95166 117 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 CTF1Q16619 201 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 Q56UQ5 140 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 RNASE10Q5GAN6 216 aaKnown RBP11.51□□□□□ -0.57
DDX55-202ENST00000354291 ARRDC1Q8N5I2 433 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 UBAC2Q8NBM4 344 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 CHRDL1Q9BU40 450 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 KLK11Q9UBX7 282 aa11.51□□□□□ -0.57
DDX55-202ENST00000354291 ZNF207O43670 478 aaKnown RBP11.5□□□□□ -0.57
DDX55-202ENST00000354291 IGKV1-39P01597 117 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 IGKV1D-39P04432 117 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 RBMY1A1P0DJD3 496 aaKnown RBP11.5□□□□□ -0.57
DDX55-202ENST00000354291 RBMY1CP0DJD4 496 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 PGAM2P15259 253 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 TBPP20226 339 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 RND3P61587 244 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 HSPE1P61604 102 aaKnown RBP11.5□□□□□ -0.57
DDX55-202ENST00000354291 RBMY1FQ15415 496 aaKnown RBP11.5□□□□□ -0.57
DDX55-202ENST00000354291 SOHLH1Q5JUK2 328 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 Q8N1X5 172 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 MRGPRFQ96AM1 343 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 TXN2Q99757 166 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 C20orf24Q9BUV8 137 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 NAA50Q9GZZ1 169 aaKnown RBP11.5□□□□□ -0.57
DDX55-202ENST00000354291 SCRT2Q9NQ03 307 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 MTFP1Q9UDX5 166 aa11.5□□□□□ -0.57
DDX55-202ENST00000354291 DMBT1Q9UGM3 2413 aaPredicted RBP11.49□□□□□ -0.57
DDX55-202ENST00000354291 IGKV3-7A0A075B6H7 116 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 IGHV3OR16-8A0A075B7F1 116 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 C15orf62A8K5M9 175 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 F8W735 103 aaPredicted RBP11.49□□□□□ -0.57
DDX55-202ENST00000354291 NUPL2O15504 423 aaKnown RBP11.49□□□□□ -0.57
DDX55-202ENST00000354291 ATG12O94817 140 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 IFNA10P01566 189 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 CD3DP04234 171 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 CTSGP08311 255 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 MFAP4P55083 255 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 CMC4P56277 68 aaPredicted RBP11.49□□□□□ -0.57
DDX55-202ENST00000354291 ERHP84090 104 aaKnown RBP11.49□□□□□ -0.57
DDX55-202ENST00000354291 PRCDQ00LT1 54 aa11.49□□□□□ -0.57
DDX55-202ENST00000354291 RELQ04864 619 aaPredicted RBP11.49□□□□□ -0.57
DDX55-202ENST00000354291 GPR107Q5VW38 600 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms