RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 FGF16O43320 207 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 PRTN3P24158 256 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 SERF2P84101 59 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 PRCDQ00LT1 54 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 LEMD1Q68G75 181 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 OR5B12Q96R08 314 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 SLC25A33Q9BSK2 321 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 HRNRQ86YZ3 2850 aaPredicted RBP8.95□□□□□ -0.98
SVIP-201ENST00000354193 IGHV3-49A0A0A0MS15 119 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 A0A1B0GWJ7 208 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 OR2J3O76001 311 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 AWAT1Q58HT5 328 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 UNQ5815/PRO19632Q6UWF5 114 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 ZNF833PQ6ZTB9 187 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 A0A1W2PPI3 338 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 GNG7O60262 68 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 S100A6P06703 90 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 FAM106CPP0CH98 169 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 ARL14EPLP0DKL9 152 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 MGST1P10620 155 aaKnown RBP8.95□□□□□ -0.98
SVIP-201ENST00000354193 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 OR2T10Q8NGZ9 312 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 CELSR2Q9HCU4 2923 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 CTXND1A0A1B0GTU2 59 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 IL6RP08887 468 aaPredicted RBP8.95□□□□□ -0.98
SVIP-201ENST00000354193 WT1-ASQ06250 92 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 SPATA31B1PQ5VZV4 182 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 DTX2Q86UW9 622 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 OR51G1Q8NGK1 321 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 C2CD4CQ8TF44 421 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 WNT10AQ9GZT5 417 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 SIGLEC9Q9Y336 463 aa8.95□□□□□ -0.98
SVIP-201ENST00000354193 A8MXK9 166 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 C11orf94C9JXX5 98 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 NBR2O15453 112 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 PRSS8Q16651 343 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 SLC35E3Q7Z769 313 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 Q8N7P7 452 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 RBM14Q96PK6 669 aaKnown RBP8.94□□□□□ -0.98
SVIP-201ENST00000354193 RPS10P46783 165 aaKnown RBP8.94□□□□□ -0.98
SVIP-201ENST00000354193 RHOBP62745 196 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 RPL11P62913 178 aaKnown RBP8.94□□□□□ -0.98
SVIP-201ENST00000354193 DDB2Q92466 427 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 VENTXO95231 258 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 UBE2L3P68036 154 aaKnown RBP8.94□□□□□ -0.98
SVIP-201ENST00000354193 ZNF90Q03938 601 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 PRR27Q6MZM9 219 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 FAM24BQ8N5W8 94 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 BET1LQ9NYM9 111 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 GAB2Q9UQC2 676 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 SVEP1Q4LDE5 3571 aa8.94□□□□□ -0.98
SVIP-201ENST00000354193 IGHV2-5P01817 119 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 SUMO1P63165 101 aaKnown RBP8.93□□□□□ -0.98
SVIP-201ENST00000354193 UQCC3Q6UW78 93 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 TMEM14BQ9NUH8 114 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 FOXA2Q9Y261 457 aaPredicted RBP8.93□□□□□ -0.98
SVIP-201ENST00000354193 RANP62826 216 aaKnown RBP8.93□□□□□ -0.98
SVIP-201ENST00000354193 CR1LQ2VPA4 569 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 P2RX4Q99571 388 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 KCNIP2Q9NS61 270 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 C1RLQ9NZP8 487 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 SOX21Q9Y651 276 aaPredicted RBP8.93□□□□□ -0.98
SVIP-201ENST00000354193 C11orf71Q6IPW1 123 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 SPNS3Q6ZMD2 512 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 TVP23CQ96ET8 276 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 SEPSECSQ9HD40 501 aaKnown RBP8.93□□□□□ -0.98
SVIP-201ENST00000354193 C2CD3Q4AC94 2353 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 C7orf77A4D0Y5 90 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 BCL2P10415 239 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 MDKP21741 143 aaPredicted RBP8.93□□□□□ -0.98
SVIP-201ENST00000354193 VDAC2P45880 294 aaPredicted RBP8.93□□□□□ -0.98
SVIP-201ENST00000354193 FAM120AOSQ5T036 256 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 MIR17HGQ75NE6 70 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 CLRN3Q8NCR9 226 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 NANPQ8TBE9 248 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 MGST2Q99735 147 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 WDR83OSQ9Y284 106 aa8.93□□□□□ -0.98
SVIP-201ENST00000354193 ZNF207O43670 478 aaKnown RBP8.92□□□□□ -0.98
SVIP-201ENST00000354193 GAMTQ14353 236 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 TMEM177Q53S58 311 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 SSX7Q7RTT5 188 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 GGTLC1Q9BX51 225 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 TRAV5A0A0B4J249 113 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 BTBD17A6NE02 478 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 H3BQ15 152 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 SPINK4O60575 86 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 CX3CL1P78423 397 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 OR5AU1Q8NGC0 362 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 BARX1Q9HBU1 254 aaPredicted RBP8.92□□□□□ -0.98
SVIP-201ENST00000354193 NDUFB4O95168 129 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 C11orf42Q8N5U0 333 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 TMEM167AQ8TBQ9 72 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 NCOR1P1Q9H4R4 102 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 ITGB1BP1O14713 200 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 OR2C1O95371 312 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 ATP5G3P48201 142 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 KRTAP10-9P60411 292 aa8.92□□□□□ -0.98
SVIP-201ENST00000354193 SAV1Q9H4B6 383 aaPredicted RBP8.92□□□□□ -0.98
SVIP-201ENST00000354193 ITPR2Q14571 2701 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 IGHV3-66A0A0C4DH42 116 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms