RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 DNLZQ5SXM8 178 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 MORN5Q5VZ52 161 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 TEX43Q6ZNM6 134 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 MOB1BQ7L9L4 216 aa11.73□□□□□ -0.53
PABPC1-201ENST00000318607 IGHV3-72A0A0B4J1Y9 119 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 RIPPLY3P57055 190 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 RPL19P84098 196 aaKnown RBP11.72□□□□□ -0.53
PABPC1-201ENST00000318607 C10orf55Q5SWW7 151 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 TM4SF20Q53R12 229 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 PEAR1Q5VY43 1037 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-201ENST00000318607 C6orf15Q6UXA7 325 aaPredicted RBP11.72□□□□□ -0.53
PABPC1-201ENST00000318607 C19orf35Q6ZS72 473 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 TSKUQ8WUA8 353 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 FLYWCH2Q96CP2 140 aaKnown RBP11.72□□□□□ -0.53
PABPC1-201ENST00000318607 C20orf144Q9BQM9 153 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 ASH1LQ9NR48 2969 aaKnown RBP11.72□□□□□ -0.53
PABPC1-201ENST00000318607 MALRD1Q5VYJ5 2156 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 PAX1P15863 534 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 MOGAT3Q86VF5 341 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 RAB37Q96AX2 223 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 FAM173AQ9BQD7 235 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 PCED1AQ9H1Q7 454 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 WDR54Q9H977 334 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 ZNF835Q9Y2P0 537 aa11.72□□□□□ -0.53
PABPC1-201ENST00000318607 SVEP1Q4LDE5 3571 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.71□□□□□ -0.53
PABPC1-201ENST00000318607 FAM90A26D6RGX4 464 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 PROP1O75360 226 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 PSG1P11464 419 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 TSPOP30536 169 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 PRDX2P32119 198 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 FBXW9Q5XUX1 488 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 WFDC3Q8IUB2 231 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 OR52E5Q8NH55 327 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 Q8TCH9 128 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 PGLYRP4Q96LB8 373 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 PRO3102Q9H379 93 aa11.71□□□□□ -0.53
PABPC1-201ENST00000318607 OR2T8A6NH00 312 aa11.71□□□□□ -0.54
PABPC1-201ENST00000318607 J3QR06 171 aa11.71□□□□□ -0.54
PABPC1-201ENST00000318607 GFRA3O60609 400 aa11.71□□□□□ -0.54
PABPC1-201ENST00000318607 Q6ZS49 121 aa11.71□□□□□ -0.54
PABPC1-201ENST00000318607 Q6ZSR3 168 aa11.71□□□□□ -0.54
PABPC1-201ENST00000318607 WFDC12Q8WWY7 111 aa11.71□□□□□ -0.54
PABPC1-201ENST00000318607 DSCAML1Q8TD84 2053 aa11.71□□□□□ -0.54
PABPC1-201ENST00000318607 LOC102723996A0A087X1L8 192 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 ENSAO43768 121 aaKnown RBP11.7□□□□□ -0.54
PABPC1-201ENST00000318607 IGLL1P15814 213 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 DUTP33316 252 aaKnown RBP11.7□□□□□ -0.54
PABPC1-201ENST00000318607 KLHDC1Q8N7A1 406 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 IL19Q9UHD0 177 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 A0A087X0K7 114 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 TMSB15BA0A087X1C1 80 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 DLX1P56177 255 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 SPRNQ5BIV9 151 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 SLC45A2Q9UMX9 530 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 V9GYV3 84 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 PIGBOS1A0A0B4J2F0 54 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 COMPP49747 757 aaPredicted RBP11.7□□□□□ -0.54
PABPC1-201ENST00000318607 HCP5Q6MZN7 132 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 OR8B3Q8NGG8 313 aa11.7□□□□□ -0.54
PABPC1-201ENST00000318607 GGTLC3B5MD39 225 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 MOSP00540 346 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 CD99P14209 185 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 CCL11P51671 97 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 EXPH5Q8NEV8 1989 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 LOC389332A0A1B0GUA5 103 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 IGKV1-16P04430 117 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 OPRK1P41145 380 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 FBLN7Q53RD9 439 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 HIGD1CA8MV81 97 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 YPEL3P61236 119 aaPredicted RBP11.69□□□□□ -0.54
PABPC1-201ENST00000318607 UBE2G1P62253 170 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 CD177Q8N6Q3 437 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 RBMXL3Q8N7X1 1067 aaKnown RBP11.69□□□□□ -0.54
PABPC1-201ENST00000318607 OR51B2Q9Y5P1 312 aa11.69□□□□□ -0.54
PABPC1-201ENST00000318607 SMIM21Q3B7S5 101 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 C1orf229Q6ZS94 237 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-201ENST00000318607 PKIBQ9C010 78 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 GSX1Q9H4S2 264 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-201ENST00000318607 TLN1Q9Y490 2541 aaKnown RBP11.68□□□□□ -0.54
PABPC1-201ENST00000318607 TRAV8-1A0A0A6YYK1 113 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 SLC25A5P05141 298 aaKnown RBP11.68□□□□□ -0.54
PABPC1-201ENST00000318607 SSBP2P81877 361 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-201ENST00000318607 RNPS1Q15287 305 aaKnown RBP11.68□□□□□ -0.54
PABPC1-201ENST00000318607 EBLN2Q6P2I7 272 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 VWA1Q6PCB0 445 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 TMEM136Q6ZRR5 245 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 HILPDAQ9Y5L2 63 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 ATRXP46100 2492 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 OR4C46A6NHA9 309 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 TMPRSS2O15393 492 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 DNPH1O43598 174 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 COX7A2P2O60397 106 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 TDGF1P13385 188 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 WDR82Q6UXN9 313 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 ACP7Q6ZNF0 438 aa11.68□□□□□ -0.54
PABPC1-201ENST00000318607 KMT2EQ8IZD2 1858 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms