RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 HIGD1CA8MV81 97 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 KIR3DP1A8MWS1 328 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 DEFB108AA8MXU0 73 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 NTN3O00634 580 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 C6orf15Q6UXA7 325 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 WDR82Q6UXN9 313 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 PDPNQ86YL7 162 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 OR2K2Q8NGT1 345 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 SSBP3Q9BWW4 388 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 CALYQ9NYX4 217 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 KLF12Q9Y4X4 402 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 TDRD6O60522 2096 aaKnown RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 SIVA1O15304 175 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 LINC01559Q495D7 138 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 C1orf162Q8NEQ5 155 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 SNRNP40Q96DI7 357 aaKnown RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 PERPQ96FX8 193 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 AMMECR1LQ6DCA0 310 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 FAM214BQ7L5A3 538 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 SSX8Q7RTT4 187 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 OR10X1Q8NGY0 326 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 ASXL3Q9C0F0 2248 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 SRCAPQ6ZRS2 3230 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 TIMM8AO60220 97 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 FRMD6-AS1P0C7T7 363 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 COX8AP10176 69 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 HSD52Q0P140 79 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 RIGQ13278 110 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 EDDM3AQ14507 147 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 LINC01545Q5VT33 79 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 S100A7AQ86SG5 101 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 TTTY12Q9BZ98 90 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 MED12Q93074 2177 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 ZNF503-AS2A6NEH8 195 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 EPDR1Q9UM22 224 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 SSUH2Q9Y2M2 353 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 NCOA6Q14686 2063 aaPredicted RBP3.91□□□□□ -1.78
PTPN13-201ENST00000316707 LOC102724200A0A096LPH7 203 aaPredicted RBP3.91□□□□□ -1.78
PTPN13-201ENST00000316707 LY6G6EA0A0G2JKS1 128 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 SCGB1A1P11684 91 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 CCL4P13236 92 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 TMEM11P17152 192 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 TMEM164Q5U3C3 297 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 FA2HQ7L5A8 372 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 U3KQA8 63 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 PCNX3Q9H6A9 2034 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 H3BRM9 83 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 CD46P15529 392 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 PAX2Q02962 417 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 FMC1Q96HJ9 113 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 MUC21A0A0G2JKD1 596 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 MUC21A0A140T8X8 626 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 OR2T8A6NH00 312 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 K7EQM0 130 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 ZNF207O43670 478 aaKnown RBP3.91□□□□□ -1.78
PTPN13-201ENST00000316707 CT45A6P0DMU7 189 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 CT45A5P0DMU8 189 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 CT45A7P0DMV0 189 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 PSG1P11464 419 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 HTR1DP28221 377 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 CT45A1Q5HYN5 189 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 MUC21Q5SSG8 566 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 RBMXL3Q8N7X1 1067 aaKnown RBP3.91□□□□□ -1.78
PTPN13-201ENST00000316707 OR4A5Q8NH83 315 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 CT45A3Q8NHU0 189 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 FAM234AQ9H0X4 552 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 CGB3P0DN86 165 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 CGB7P0DN87 165 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 C11orf53Q8IXP5 236 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 C1orf159Q96HA4 380 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 PRSS22Q9GZN4 317 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 KBTBD11-OT1A0A1B0GTJ5 212 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 ZNF826PQ6ZT77 177 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 ZNF503Q96F45 646 aa3.91□□□□□ -1.78
PTPN13-201ENST00000316707 DOCK8Q8NF50 2099 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 SLC25A5P05141 298 aaKnown RBP3.9□□□□□ -1.78
PTPN13-201ENST00000316707 IGLC1P0CG04 106 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 FABP2P12104 132 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 FOXA3P55318 350 aaPredicted RBP3.9□□□□□ -1.78
PTPN13-201ENST00000316707 RNASE2P10153 161 aaKnown RBP3.9□□□□□ -1.78
PTPN13-201ENST00000316707 RPL39P5Q59GN2 51 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 Q6ZT83 130 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 FAM169BQ8N8A8 192 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 TMEM178AQ8NBL3 297 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 Q8TCH9 128 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 FAM167A-AS1Q96KT0 104 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 MEGF9Q9H1U4 602 aa3.9□□□□□ -1.78
PTPN13-201ENST00000316707 ASCC3Q8N3C0 2202 aaKnown RBP3.9□□□□□ -1.78
PTPN13-201ENST00000316707 K7EP34 96 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 FAM87AP0C7U9 286 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 MAGEA5P43359 124 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 ALKBH6Q3KRA9 238 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 TPRX1Q8N7U7 411 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 TRAV3A0A0B4J244 114 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 A0A1B0GUT8 65 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 TCRBV4S1A1TA0A5B7 111 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 A1L4Q6 167 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 TM4SF5O14894 197 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 WNT9BO14905 357 aa3.9□□□□□ -1.79
PTPN13-201ENST00000316707 FOXH1O75593 365 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 251.1 ms