RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 IGF1P05019 195 aa14.89□□□□□ -0.03
PDLIM3-202ENST00000284770 RAB11AP62491 216 aa14.89□□□□□ -0.03
PDLIM3-202ENST00000284770 AKIRIN2Q53H80 203 aa14.89□□□□□ -0.03
PDLIM3-202ENST00000284770 OR10P1Q8NGE3 313 aa14.89□□□□□ -0.03
PDLIM3-202ENST00000284770 TMEM68Q96MH6 324 aa14.89□□□□□ -0.03
PDLIM3-202ENST00000284770 NPIPB5A8MRT5 1133 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 TRIM77I1YAP6 450 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 SCAF4O95104 1147 aaKnown RBP14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 CRYGCP07315 174 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 OR8U8P0C7N1 319 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 CTRB1P17538 263 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 CRIP2P52943 208 aaPredicted RBP14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 CTRB2Q6GPI1 263 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 LILRB2Q8N423 598 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 TTC9CQ8N5M4 171 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 PINX1Q96BK5 328 aaKnown RBP14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 PRSS22Q9GZN4 317 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 UNQ5815/PRO19632Q6UWF5 114 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 ETV3LQ6ZN32 361 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 OR1P1Q8NH06 330 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 TMED6Q8WW62 240 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 JMJD8Q96S16 334 aa14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 F11RQ9Y624 299 aaKnown RBP14.88□□□□□ -0.03
PDLIM3-202ENST00000284770 NSD1Q96L73 2696 aaPredicted RBP14.87□□□□□ -0.03
PDLIM3-202ENST00000284770 RPS10-NUDT3A0A1W2PQS6 291 aa14.87□□□□□ -0.03
PDLIM3-202ENST00000284770 IFNA4P05014 189 aa14.87□□□□□ -0.03
PDLIM3-202ENST00000284770 RNASE1P07998 156 aaKnown RBP14.87□□□□□ -0.03
PDLIM3-202ENST00000284770 ATP6V1FQ16864 119 aa14.87□□□□□ -0.03
PDLIM3-202ENST00000284770 ECSCRQ19T08 205 aa14.87□□□□□ -0.03
PDLIM3-202ENST00000284770 FAM74A1Q5RGS3 127 aa14.87□□□□□ -0.03
PDLIM3-202ENST00000284770 PVRIGQ6DKI7 326 aa14.87□□□□□ -0.03
PDLIM3-202ENST00000284770 WNT10AQ9GZT5 417 aa14.87□□□□□ -0.03
PDLIM3-202ENST00000284770 FAM181BA6NEQ2 426 aa14.86□□□□□ -0.03
PDLIM3-202ENST00000284770 G3V318 75 aa14.86□□□□□ -0.03
PDLIM3-202ENST00000284770 AP4M1O00189 453 aa14.86□□□□□ -0.03
PDLIM3-202ENST00000284770 FBXO24O75426 580 aa14.86□□□□□ -0.03
PDLIM3-202ENST00000284770 VWC2Q2TAL6 325 aa14.86□□□□□ -0.03
PDLIM3-202ENST00000284770 C19orf35Q6ZS72 473 aa14.86□□□□□ -0.03
PDLIM3-202ENST00000284770 HSD17B11Q8NBQ5 300 aa14.86□□□□□ -0.03
PDLIM3-202ENST00000284770 ZNF702PQ9H963 129 aa14.86□□□□□ -0.03
PDLIM3-202ENST00000284770 TRAV41A0A0B4J266 112 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 SPP1P10451 314 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 DEFA4P12838 97 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 C19orf54Q5BKX5 351 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 OR5T1Q8NG75 326 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 OR1L6Q8NGR2 347 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 TMEM147Q9BVK8 224 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 PARD6GQ9BYG4 376 aaPredicted RBP14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 ZNF580Q9UK33 172 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 FN1P02751 2386 aaKnown RBP14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 ATP6V0CP27449 155 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 MFAP2P55001 183 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 RPL15P61313 204 aaKnown RBP14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 CLLU1Q5K131 121 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 EIF5AL1Q6IS14 154 aaKnown RBP14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 Q8N2B8 174 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 FAM110DQ8TAY7 271 aaPredicted RBP14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 RNASEH2CQ8TDP1 164 aaKnown RBP14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 SH3BGRL3Q9H299 93 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 PLA2G2EQ9NZK7 142 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 LINC00527Q9UJ94 153 aa14.85□□□□□ -0.03
PDLIM3-202ENST00000284770 IFNA5P01569 189 aa14.84□□□□□ -0.03
PDLIM3-202ENST00000284770 SEC11BP0C7V7 166 aa14.84□□□□□ -0.03
PDLIM3-202ENST00000284770 PCNPQ8WW12 178 aaKnown RBP14.84□□□□□ -0.03
PDLIM3-202ENST00000284770 NOL4LQ96MY1 436 aaPredicted RBP14.84□□□□□ -0.03
PDLIM3-202ENST00000284770 GGACTQ9BVM4 153 aa14.84□□□□□ -0.03
PDLIM3-202ENST00000284770 UQCC1Q9NVA1 299 aa14.84□□□□□ -0.03
PDLIM3-202ENST00000284770 DMRT1Q9Y5R6 373 aa14.84□□□□□ -0.03
PDLIM3-202ENST00000284770 UBE2L5PA0A1B0GUS4 154 aa14.83□□□□□ -0.03
PDLIM3-202ENST00000284770 NMBP08949 121 aa14.83□□□□□ -0.03
PDLIM3-202ENST00000284770 MDKP21741 143 aaPredicted RBP14.83□□□□□ -0.03
PDLIM3-202ENST00000284770 DLK1P80370 383 aa14.83□□□□□ -0.03
PDLIM3-202ENST00000284770 RUNX1Q01196 453 aa14.83□□□□□ -0.03
PDLIM3-202ENST00000284770 SLC25A24Q6NUK1 477 aa14.83□□□□□ -0.03
PDLIM3-202ENST00000284770 WDR61Q9GZS3 305 aaKnown RBP14.83□□□□□ -0.03
PDLIM3-202ENST00000284770 SLC25A32Q9H2D1 315 aa14.83□□□□□ -0.03
PDLIM3-202ENST00000284770 RFNGQ9Y644 331 aa14.83□□□□□ -0.03
PDLIM3-202ENST00000284770 CUBNO60494 3623 aa14.83□□□□□ -0.04
PDLIM3-202ENST00000284770 CORTO00230 105 aa14.83□□□□□ -0.04
PDLIM3-202ENST00000284770 TMEM95Q3KNT9 176 aa14.83□□□□□ -0.04
PDLIM3-202ENST00000284770 CYB5BO43169 146 aa14.82□□□□□ -0.04
PDLIM3-202ENST00000284770 TCF21O43680 179 aa14.82□□□□□ -0.04
PDLIM3-202ENST00000284770 PRH1P02810 166 aa14.82□□□□□ -0.04
PDLIM3-202ENST00000284770 ARSJQ5FYB0 599 aaPredicted RBP14.82□□□□□ -0.04
PDLIM3-202ENST00000284770 GNPNAT1Q96EK6 184 aaPredicted RBP14.82□□□□□ -0.04
PDLIM3-202ENST00000284770 FANCD2OSQ96PS1 177 aa14.82□□□□□ -0.04
PDLIM3-202ENST00000284770 IGLV11-55A0A075B6I3 123 aa14.81□□□□□ -0.04
PDLIM3-202ENST00000284770 CRYBA1P05813 215 aa14.81□□□□□ -0.04
PDLIM3-202ENST00000284770 PPIFP30405 207 aaKnown RBP14.81□□□□□ -0.04
PDLIM3-202ENST00000284770 RAB14P61106 215 aa14.81□□□□□ -0.04
PDLIM3-202ENST00000284770 CD69Q07108 199 aa14.81□□□□□ -0.04
PDLIM3-202ENST00000284770 KLK9Q2XQG4 91 aa14.81□□□□□ -0.04
PDLIM3-202ENST00000284770 TAF15Q92804 592 aaKnown RBP eCLIP14.81□□□□□ -0.04
PDLIM3-202ENST00000284770 MISP3Q96FF7 219 aa14.81□□□□□ -0.04
PDLIM3-202ENST00000284770 KLK9Q9UKQ9 250 aa14.81□□□□□ -0.04
PDLIM3-202ENST00000284770 SOX15O60248 233 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 TSPAN9O75954 239 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 GPX4P36969 197 aaPredicted RBP14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 OPRK1P41145 380 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 SULT1A2P50226 295 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms