RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZNF562Q6V9R5 426 aa14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 WFDC1Q9HC57 220 aa14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 COLQQ9Y215 455 aaPredicted RBP14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 HBDP02042 147 aa14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 C5orf24Q7Z6I8 188 aa14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 PRDM13Q9H4Q3 707 aa14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 CARHSP1Q9Y2V2 147 aaKnown RBP14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 NR2C2APQ86WQ0 139 aa14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 TRPM3Q9HCF6 1732 aaPredicted RBP14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 A0A0G2JK05 382 aa14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 FMC1Q96HJ9 113 aa14.1□□□□□ -0.15
TSPAN3-201ENST00000267970 CFAP161Q6P656 301 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 ORMDL3Q8N138 153 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 ZNF525Q8N782 197 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 RNF126Q9BV68 326 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 KIF13BQ9NQT8 1826 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 NDUFS6O75380 124 aaKnown RBP14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 ATP5LO75964 103 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 LRTM2Q8N967 370 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 CD300EQ496F6 205 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 SAMD5Q5TGI4 173 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 ARPC1AQ92747 370 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 STRCQ7RTU9 1775 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 SAXO1Q8IYX7 474 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 A8MXK9 166 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 NCR2O95944 276 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 GTF3AQ92664 365 aaKnown RBP14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 TNFRSF14Q92956 283 aa14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 PHLDA1Q8WV24 401 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-201ENST00000267970 VENTXO95231 258 aa14.08□□□□□ -0.15
TSPAN3-201ENST00000267970 EIF4EBP2Q13542 120 aaPredicted RBP14.08□□□□□ -0.15
TSPAN3-201ENST00000267970 GATD1Q8NB37 220 aa14.08□□□□□ -0.15
TSPAN3-201ENST00000267970 C21orf62Q9NYP8 219 aa14.08□□□□□ -0.15
TSPAN3-201ENST00000267970 H3BRM9 83 aa14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 TPTE2P1Q5T6R2 138 aa14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 GTSCR1Q86UQ5 136 aa14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 SAP25Q8TEE9 199 aa14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 ZFAND6Q6FIF0 208 aa14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 C1orf174Q8IYL3 243 aa14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 UMODP07911 640 aa14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 SAA2-SAA4A0A096LPE2 208 aa14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 SAA2P0DJI9 122 aaPredicted RBP14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 OR10W1Q8NGF6 305 aa14.08□□□□□ -0.16
TSPAN3-201ENST00000267970 FOXH1O75593 365 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 GLI3P10071 1580 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 CHD5Q8TDI0 1954 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 GDF15Q99988 308 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 C5orf67F2Z3F1 127 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 IGHMP01871 453 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 CXCL1P09341 107 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 CA7P43166 264 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 PAPPA-AS1Q5QFB9 102 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 FAM181AQ8N9Y4 354 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 NDUFAF3Q9BU61 184 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 SLC25A20O43772 301 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 TIMM23BQ5SRD1 257 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 SMIM10L1P0DMW3 83 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 OCC1Q8TAD7 63 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 SMIM10Q96HG1 83 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 VCX2Q9H322 139 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 CACNA1DQ01668 2161 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 CACNA1IQ9P0X4 2223 aa14.07□□□□□ -0.16
TSPAN3-201ENST00000267970 TMEM42Q69YG0 159 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 BMPERQ8N8U9 685 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 C19orf24Q9BVV8 132 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST1H2BKO60814 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 NAPSAO96009 420 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST1H2BJP06899 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST1H2BOP23527 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST1H2BBP33778 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 BTCP35070 178 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST1H2BDP58876 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST1H2BCP62807 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST2H2BEQ16778 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 GAGE13Q4V321 117 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 MRAPQ8TCY5 172 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST1H2BHQ93079 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST1H2BNQ99877 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 HIST1H2BMQ99879 126 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 NXT2Q9NPJ8 142 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 TDGF1P3P51864 188 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 GAGE2BQ13066 116 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 GAGE2EQ4V326 116 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 ORAOV1Q8WV07 137 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 SCRT1Q9BWW7 348 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 GAGE2DQ9UEU5 116 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 A8MWV9 139 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 MESP1Q9BRJ9 268 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 PILRBQ9UKJ0 227 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 POLR2AP24928 1970 aaKnown RBP14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 PSG7Q13046 419 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 CFHR5Q9BXR6 569 aa14.06□□□□□ -0.16
TSPAN3-201ENST00000267970 CEACAM1P13688 526 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 CTHRC1Q96CG8 243 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 ZNF479Q96JC4 524 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 CHTOPQ9Y3Y2 248 aaKnown RBP14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 MTCL1Q9Y4B5 1905 aaKnown RBP14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 IGKV2-40A0A087WW87 121 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms