RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 CORO2AQ92828 525 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 SLC35E1Q96K37 410 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 ZNF331Q9NQX6 463 aaPredicted RBP14.26□□□□□ -0.13
TRAM1-201ENST00000262213 SLC25A10Q9UBX3 287 aaPredicted RBP14.26□□□□□ -0.13
TRAM1-201ENST00000262213 PLCE1Q9P212 2302 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 SRRM4A7MD48 611 aaKnown RBP14.26□□□□□ -0.13
TRAM1-201ENST00000262213 MMP23AO75900 390 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 CTRLP40313 264 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 GPR6P46095 362 aaPredicted RBP14.26□□□□□ -0.13
TRAM1-201ENST00000262213 UBE2L3P68036 154 aaKnown RBP14.26□□□□□ -0.13
TRAM1-201ENST00000262213 MRPL52Q86TS9 123 aaKnown RBP14.26□□□□□ -0.13
TRAM1-201ENST00000262213 ITLN1Q8WWA0 313 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 SGK494Q96LW2 274 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 ZNF355PQ9NSJ1 428 aa14.26□□□□□ -0.13
TRAM1-201ENST00000262213 ROS1P08922 2347 aa14.25□□□□□ -0.13
TRAM1-201ENST00000262213 SNRNP40Q96DI7 357 aaKnown RBP14.25□□□□□ -0.13
TRAM1-201ENST00000262213 UQCR10Q9UDW1 63 aa14.25□□□□□ -0.13
TRAM1-201ENST00000262213 ISLRO14498 428 aa14.25□□□□□ -0.13
TRAM1-201ENST00000262213 IGLC2P0DOY2 106 aa14.25□□□□□ -0.13
TRAM1-201ENST00000262213 IGLC3P0DOY3 106 aa14.25□□□□□ -0.13
TRAM1-201ENST00000262213 PYYP10082 97 aa14.25□□□□□ -0.13
TRAM1-201ENST00000262213 HINT1P49773 126 aaPredicted RBP14.25□□□□□ -0.13
TRAM1-201ENST00000262213 SRSF6Q13247 344 aaKnown RBP14.25□□□□□ -0.13
TRAM1-201ENST00000262213 OR2T6Q8NHC8 308 aa14.25□□□□□ -0.13
TRAM1-201ENST00000262213 SSBP4Q9BWG4 385 aaPredicted RBP14.25□□□□□ -0.13
TRAM1-201ENST00000262213 HLA-DQA1P01909 254 aa14.24□□□□□ -0.13
TRAM1-201ENST00000262213 TAS2R45P59539 299 aa14.24□□□□□ -0.13
TRAM1-201ENST00000262213 MBNL2Q5VZF2 373 aaKnown RBP14.24□□□□□ -0.13
TRAM1-201ENST00000262213 ZNF439Q8NDP4 499 aa14.24□□□□□ -0.13
TRAM1-201ENST00000262213 SPENQ96T58 3664 aaKnown RBP14.24□□□□□ -0.13
TRAM1-201ENST00000262213 NAV3Q8IVL0 2385 aa14.24□□□□□ -0.13
TRAM1-201ENST00000262213 M0R1B8 84 aa14.24□□□□□ -0.13
TRAM1-201ENST00000262213 MFAP2P55001 183 aa14.24□□□□□ -0.13
TRAM1-201ENST00000262213 SSBP2P81877 361 aaPredicted RBP14.24□□□□□ -0.13
TRAM1-201ENST00000262213 LHFPL4Q7Z7J7 247 aa14.24□□□□□ -0.13
TRAM1-201ENST00000262213 TEX50A0A1B0GTY4 177 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 PLAUP00749 431 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 CAMPP49913 170 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 PPOXP50336 477 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 PRRX1P54821 245 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 IGF2BP2-AS1Q96M15 143 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 PRNDQ9UKY0 176 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 KBTBD11-OT1A0A1B0GTJ5 212 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 SMIM27A0A1W2PRY6 76 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 C8orf88P0DMB2 117 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 PRCDQ00LT1 54 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 MZT1Q08AG7 82 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 Q56UQ5 140 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 HES3Q5TGS1 186 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 CLEC7AQ9BXN2 247 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 ZFP30Q9Y2G7 519 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 LAMTOR2Q9Y2Q5 125 aa14.23□□□□□ -0.13
TRAM1-201ENST00000262213 PLXNB1O43157 2135 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 LINC00614P0C842 121 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 SFTPCP11686 197 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 TNXAQ16473 311 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 RNASEKQ6P5S7 137 aaKnown RBP14.22□□□□□ -0.13
TRAM1-201ENST00000262213 C18orf32Q8TCD1 76 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 CCL13Q99616 98 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 SLC25A33Q9BSK2 321 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 DCAF16Q9NXF7 216 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 RPH3ALQ9UNE2 315 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 IZUMO1RA6ND01 250 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 UPK2O00526 184 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 NDUFB8O95169 186 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 BOD1L1Q8NFC6 3051 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 DSCAML1Q8TD84 2053 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 A0A1W2PN81 502 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 HSBP1O75506 76 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 RPL8P62917 257 aaKnown RBP14.22□□□□□ -0.13
TRAM1-201ENST00000262213 BHLHA15Q7RTS1 189 aaPredicted RBP14.22□□□□□ -0.13
TRAM1-201ENST00000262213 FAM216BQ8N7L0 139 aa14.22□□□□□ -0.13
TRAM1-201ENST00000262213 CEP250Q9BV73 2442 aa14.21□□□□□ -0.13
TRAM1-201ENST00000262213 NKX2-8O15522 239 aa14.21□□□□□ -0.13
TRAM1-201ENST00000262213 CGB3P0DN86 165 aa14.21□□□□□ -0.13
TRAM1-201ENST00000262213 CGB7P0DN87 165 aa14.21□□□□□ -0.13
TRAM1-201ENST00000262213 REG1BP48304 166 aa14.21□□□□□ -0.13
TRAM1-201ENST00000262213 CR1LQ2VPA4 569 aa14.21□□□□□ -0.13
TRAM1-201ENST00000262213 GDF5OSQ5U4N7 250 aa14.21□□□□□ -0.13
TRAM1-201ENST00000262213 STUMQ69YW2 141 aa14.21□□□□□ -0.13
TRAM1-201ENST00000262213 SLC25A2Q9BXI2 301 aa14.21□□□□□ -0.13
TRAM1-201ENST00000262213 IGLV1-44P01699 117 aa14.21□□□□□ -0.14
TRAM1-201ENST00000262213 SAA1P0DJI8 122 aaPredicted RBP14.21□□□□□ -0.14
TRAM1-201ENST00000262213 CT45A6P0DMU7 189 aa14.21□□□□□ -0.14
TRAM1-201ENST00000262213 CT45A5P0DMU8 189 aa14.21□□□□□ -0.14
TRAM1-201ENST00000262213 CT45A7P0DMV0 189 aa14.21□□□□□ -0.14
TRAM1-201ENST00000262213 GNG5P63218 68 aa14.21□□□□□ -0.14
TRAM1-201ENST00000262213 AMMECR1Q9Y4X0 333 aaPredicted RBP14.21□□□□□ -0.14
TRAM1-201ENST00000262213 M0R2Z0 102 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 CORTO00230 105 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 RNASE2P10153 161 aaKnown RBP14.2□□□□□ -0.14
TRAM1-201ENST00000262213 GUSBP1Q15486 140 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 FDCSPQ8NFU4 85 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 TANC2Q9HCD6 1990 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 A0A1W2PRE2 83 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 CD59P13987 128 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 UNQ5815/PRO19632Q6UWF5 114 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 TP73-AS1Q9UF72 201 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 PROCRQ9UNN8 238 aa14.2□□□□□ -0.14
TRAM1-201ENST00000262213 CD24P25063 80 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms