RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 IGKV1-16P04430 117 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 TYMSP04818 313 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 STAG3L2P0CL84 134 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 STAG3L3P0CL85 134 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 OPRK1P41145 380 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 TMEM249Q2WGJ8 235 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 MAJINQ3KP22 176 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 LBHQ53QV2 105 aaPredicted RBP8.28□□□□□ -1.08
COPB1-201ENST00000249923 COL5A1-AS1Q5SY13 56 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 OR4A47Q6IF82 309 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 OR52E5Q8NH55 327 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 SARAFQ96BY9 339 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 NEU1Q99519 415 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 LPAR2Q9HBW0 351 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 SLC35D1Q9NTN3 355 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 PXMP4Q9Y6I8 212 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 ZFHX2Q9C0A1 2572 aaPredicted RBP8.28□□□□□ -1.08
COPB1-201ENST00000249923 NAV3Q8IVL0 2385 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 FAM90A9PA6NNJ1 464 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 C15orf61A6NNL5 157 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 SRRM4A7MD48 611 aaKnown RBP8.28□□□□□ -1.08
COPB1-201ENST00000249923 CEACAM4O75871 244 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 CRYBB3P26998 211 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 SLC24A4Q8NFF2 622 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 TMEM14BQ9NUH8 114 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 IDI2-AS1Q9NZ38 188 aa8.28□□□□□ -1.08
COPB1-201ENST00000249923 IGLV3-9A0A075B6K5 115 aa8.27□□□□□ -1.08
COPB1-201ENST00000249923 VENTXO95231 258 aa8.27□□□□□ -1.08
COPB1-201ENST00000249923 GNG4P50150 75 aa8.27□□□□□ -1.08
COPB1-201ENST00000249923 ZNF137PP52743 207 aa8.27□□□□□ -1.08
COPB1-201ENST00000249923 PMCHL1Q16048 86 aa8.27□□□□□ -1.08
COPB1-201ENST00000249923 ZNF331Q9NQX6 463 aaPredicted RBP8.27□□□□□ -1.08
COPB1-201ENST00000249923 DYSFO75923 2080 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 VPS13CQ709C8 3753 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 FOXA3P55318 350 aaPredicted RBP8.27□□□□□ -1.09
COPB1-201ENST00000249923 TIGITQ495A1 244 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 RNASEH2CQ8TDP1 164 aaKnown RBP8.27□□□□□ -1.09
COPB1-201ENST00000249923 FAM222BQ8WU58 562 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 TP73-AS1Q9UF72 201 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 A0A1W2PRD5 423 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 A0A1W2PRF3 423 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 A0A1W2PRM7 423 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 IL6RP08887 468 aaPredicted RBP8.27□□□□□ -1.09
COPB1-201ENST00000249923 RPL19P84098 196 aaKnown RBP8.27□□□□□ -1.09
COPB1-201ENST00000249923 EFNB3Q15768 340 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 STUMQ69YW2 141 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 Q6ZWC4 215 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 FAM216BQ8N7L0 139 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 FAM169BQ8N8A8 192 aa8.27□□□□□ -1.09
COPB1-201ENST00000249923 SSBP4Q9BWG4 385 aaPredicted RBP8.27□□□□□ -1.09
COPB1-201ENST00000249923 CREBBPQ92793 2442 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 TM4SF5O14894 197 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 LINC00310P59036 64 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 C1orf194Q5T5A4 169 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 OR2D3Q8NGH3 330 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 ZNF503Q96F45 646 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 ZC2HC1AQ96GY0 325 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 GAFA1Q96PS6 74 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 KCNIP2Q9NS61 270 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 HRNRQ86YZ3 2850 aaPredicted RBP8.26□□□□□ -1.09
COPB1-201ENST00000249923 IGHV3-21A0A0B4J1V1 117 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 TRGV8A0A0C4DH27 118 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 CA2P00918 260 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 KRTCAP3Q53RY4 240 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 MMD2Q8IY49 270 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 STPG3Q8N7X2 389 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 BLNKQ8WV28 456 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 S1PR3Q99500 378 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 TP53TG3Q9ULZ0 132 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 WASHC3Q9Y3C0 194 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 KBTBD11-OT1A0A1B0GTJ5 212 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 MKRN2OSH3BPM6 223 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 PDE6DO43924 150 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 LINC00869P0C866 280 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 IGFBP2P18065 325 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 CD24P25063 80 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 RAB31Q13636 194 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 MLANAQ16655 118 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 RPEL1Q2QD12 228 aa8.26□□□□□ -1.09
COPB1-201ENST00000249923 FOXA2Q9Y261 457 aaPredicted RBP8.26□□□□□ -1.09
COPB1-201ENST00000249923 M0QZ24 198 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 IGHV1-46P01743 117 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 SRP14P37108 136 aaKnown RBP8.25□□□□□ -1.09
COPB1-201ENST00000249923 MFAP2P55001 183 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 PRR20EP86478 221 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 PRR20CP86479 221 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 PRR20DP86480 221 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 PRR20BP86481 221 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 PRR20AP86496 221 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 NAA38Q9BRA0 125 aaKnown RBP8.25□□□□□ -1.09
COPB1-201ENST00000249923 ELOVL5Q9NYP7 299 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 CEP295Q9C0D2 2601 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 E7EUB6 86 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 M0R2Z0 102 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 CT45A6P0DMU7 189 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 CT45A5P0DMU8 189 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 CT45A7P0DMV0 189 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 TIMP3P35625 211 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 GLRXP35754 106 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 GATA4P43694 442 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms