RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 PIGPP57054 158 aa18.98■□□□□ 0.63
VEGFA-230ENST00000640482 SPCS2Q15005 226 aa18.98■□□□□ 0.63
VEGFA-230ENST00000640482 SLC16A13Q7RTY0 426 aa18.98■□□□□ 0.63
VEGFA-230ENST00000640482 TMEM61Q8N0U2 210 aa18.98■□□□□ 0.63
VEGFA-230ENST00000640482 MIXL1Q9H2W2 232 aa18.98■□□□□ 0.63
VEGFA-230ENST00000640482 MRPL27Q9P0M9 148 aaKnown RBP18.98■□□□□ 0.63
VEGFA-230ENST00000640482 GABARAPH6UMI1 98 aa18.97■□□□□ 0.63
VEGFA-230ENST00000640482 PI3P19957 117 aa18.97■□□□□ 0.63
VEGFA-230ENST00000640482 MRPS10P82664 201 aaKnown RBP18.97■□□□□ 0.63
VEGFA-230ENST00000640482 BTNL8Q6UX41 500 aa18.97■□□□□ 0.63
VEGFA-230ENST00000640482 CLVS1Q8IUQ0 354 aaPredicted RBP18.97■□□□□ 0.63
VEGFA-230ENST00000640482 OR1P1Q8NH06 330 aa18.97■□□□□ 0.63
VEGFA-230ENST00000640482 SCARB1Q8WTV0 552 aa18.97■□□□□ 0.63
VEGFA-230ENST00000640482 RAB2BQ8WUD1 216 aa18.97■□□□□ 0.63
VEGFA-230ENST00000640482 CEPT1Q9Y6K0 416 aa18.97■□□□□ 0.63
VEGFA-230ENST00000640482 IGHV3-21A0A0B4J1V1 117 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 OR11H12B2RN74 326 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 RAB3DO95716 219 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 CD74P04233 296 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 C8orf88P0DMB2 117 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 PPP5CP53041 499 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 PRCDQ00LT1 54 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 SSBP1Q04837 148 aaKnown RBP18.96■□□□□ 0.63
VEGFA-230ENST00000640482 DEFB125Q8N687 156 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 TERB2Q8NHR7 220 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 ZFAND1Q8TCF1 268 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 TMEM190Q8WZ59 177 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 COPZ2Q9P299 210 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 SELENOKQ9Y6D0 94 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 DNAH7Q8WXX0 4024 aa18.96■□□□□ 0.63
VEGFA-230ENST00000640482 K7EIM0 57 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 ATG12O94817 140 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 HSPE1P61604 102 aaKnown RBP18.95■□□□□ 0.62
VEGFA-230ENST00000640482 ANKRD55Q3KP44 614 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 SCGB2B2Q4G0G5 96 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 Q56UQ5 140 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 STEAP1BQ6NZ63 245 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 LINC00322Q6ZN03 302 aaPredicted RBP18.95■□□□□ 0.62
VEGFA-230ENST00000640482 OR2C3Q8N628 320 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 CCDC71LQ8N9Z2 235 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 UBAC2Q8NBM4 344 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 OR4D10Q8NGI6 311 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 BCL7BQ9BQE9 202 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 SRD5A3Q9H8P0 318 aa18.95■□□□□ 0.62
VEGFA-230ENST00000640482 STAB2Q8WWQ8 2551 aa18.94■□□□□ 0.62
VEGFA-230ENST00000640482 TRAV25A0A0B4J276 109 aa18.94■□□□□ 0.62
VEGFA-230ENST00000640482 NDUFA4O00483 81 aa18.94■□□□□ 0.62
VEGFA-230ENST00000640482 CTDSP2O14595 271 aa18.94■□□□□ 0.62
VEGFA-230ENST00000640482 RBPMS2Q6ZRY4 209 aaKnown RBP18.94■□□□□ 0.62
VEGFA-230ENST00000640482 OR52B4Q8NGK2 314 aa18.94■□□□□ 0.62
VEGFA-230ENST00000640482 ISOC1Q96CN7 298 aa18.94■□□□□ 0.62
VEGFA-230ENST00000640482 TP53RKQ96S44 253 aa18.94■□□□□ 0.62
VEGFA-230ENST00000640482 GAR1Q9NY12 217 aaKnown RBP18.94■□□□□ 0.62
VEGFA-230ENST00000640482 C3orf85A0A1B0GTC6 90 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 SCAF4O95104 1147 aaKnown RBP18.93■□□□□ 0.62
VEGFA-230ENST00000640482 LYL1P12980 280 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 AKR1C2P52895 323 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 TMBIM6P55061 237 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 ERHP84090 104 aaKnown RBP18.93■□□□□ 0.62
VEGFA-230ENST00000640482 MEF2DQ14814 521 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 CASC10Q5T4H9 136 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 ZNF114Q8NC26 417 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 MISP3Q96FF7 219 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 CHRDL1Q9BU40 450 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 WFDC10AQ9H1F0 79 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 DAZ1Q9NQZ3 744 aaKnown RBP18.93■□□□□ 0.62
VEGFA-230ENST00000640482 CCDC59Q9P031 241 aaKnown RBP18.93■□□□□ 0.62
VEGFA-230ENST00000640482 RABL2AQ9UBK7 228 aaPredicted RBP18.93■□□□□ 0.62
VEGFA-230ENST00000640482 RABL2BQ9UNT1 228 aa18.93■□□□□ 0.62
VEGFA-230ENST00000640482 F8W735 103 aaPredicted RBP18.92■□□□□ 0.62
VEGFA-230ENST00000640482 TRIM16LQ309B1 348 aa18.92■□□□□ 0.62
VEGFA-230ENST00000640482 OR13C8Q8NGS7 320 aa18.92■□□□□ 0.62
VEGFA-230ENST00000640482 RBMY1BA6NDE4 496 aaKnown RBP18.91■□□□□ 0.62
VEGFA-230ENST00000640482 RBMY1EA6NEQ0 496 aaKnown RBP18.91■□□□□ 0.62
VEGFA-230ENST00000640482 B3GALNT1O75752 331 aa18.91■□□□□ 0.62
VEGFA-230ENST00000640482 IGKV1-5P01602 117 aa18.91■□□□□ 0.62
VEGFA-230ENST00000640482 RBMY1DP0C7P1 496 aaKnown RBP18.91■□□□□ 0.62
VEGFA-230ENST00000640482 IL18Q14116 193 aa18.91■□□□□ 0.62
VEGFA-230ENST00000640482 DYNC2LI1Q8TCX1 351 aa18.91■□□□□ 0.62
VEGFA-230ENST00000640482 SMIM4Q8WVI0 70 aa18.91■□□□□ 0.62
VEGFA-230ENST00000640482 DIRAS2Q96HU8 199 aa18.91■□□□□ 0.62
VEGFA-230ENST00000640482 C5orf66Q9H5L9 145 aa18.91■□□□□ 0.62
VEGFA-230ENST00000640482 EDA2RQ9HAV5 297 aa18.91■□□□□ 0.62
VEGFA-230ENST00000640482 NOL3O60936 208 aaKnown RBP18.9■□□□□ 0.62
VEGFA-230ENST00000640482 CTSDP07339 412 aaPredicted RBP18.9■□□□□ 0.62
VEGFA-230ENST00000640482 MFAP4P55083 255 aa18.9■□□□□ 0.62
VEGFA-230ENST00000640482 RELQ04864 619 aaPredicted RBP18.9■□□□□ 0.62
VEGFA-230ENST00000640482 IZUMO4Q1ZYL8 232 aa18.9■□□□□ 0.62
VEGFA-230ENST00000640482 MARCH1Q8TCQ1 289 aa18.9■□□□□ 0.62
VEGFA-230ENST00000640482 TXN2Q99757 166 aa18.9■□□□□ 0.62
VEGFA-230ENST00000640482 C20orf24Q9BUV8 137 aa18.9■□□□□ 0.62
VEGFA-230ENST00000640482 HIPK2Q9H2X6 1198 aa18.9■□□□□ 0.62
VEGFA-230ENST00000640482 DISC1C4P0D8 188 aa18.89■□□□□ 0.61
VEGFA-230ENST00000640482 I3L2K1 104 aa18.89■□□□□ 0.61
VEGFA-230ENST00000640482 K7EMT4 169 aa18.89■□□□□ 0.61
VEGFA-230ENST00000640482 CTDSPLO15194 276 aa18.89■□□□□ 0.61
VEGFA-230ENST00000640482 NUPL2O15504 423 aaKnown RBP18.89■□□□□ 0.61
VEGFA-230ENST00000640482 FCGR2BP31994 310 aaPredicted RBP18.89■□□□□ 0.61
VEGFA-230ENST00000640482 ADMP35318 185 aa18.89■□□□□ 0.61
VEGFA-230ENST00000640482 LAMTOR1Q6IAA8 161 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms