RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 TSPAN14Q8NG11 270 aa14□□□□□ -0.17
SMN2-215ENST00000628696 SMPXQ9UHP9 88 aa14□□□□□ -0.17
SMN2-215ENST00000628696 IGKV3-7A0A075B6H7 116 aa13.99□□□□□ -0.17
SMN2-215ENST00000628696 IGHV3-49A0A0A0MS15 119 aa13.99□□□□□ -0.17
SMN2-215ENST00000628696 F8W735 103 aaPredicted RBP13.99□□□□□ -0.17
SMN2-215ENST00000628696 K7EIM0 57 aa13.99□□□□□ -0.17
SMN2-215ENST00000628696 PGLYRP1O75594 196 aaPredicted RBP13.99□□□□□ -0.17
SMN2-215ENST00000628696 G6PCP35575 357 aa13.99□□□□□ -0.17
SMN2-215ENST00000628696 RFX2P48378 723 aa13.99□□□□□ -0.17
SMN2-215ENST00000628696 ZNF124Q15973 351 aa13.99□□□□□ -0.17
SMN2-215ENST00000628696 FCAMRQ8WWV6 532 aa13.99□□□□□ -0.17
SMN2-215ENST00000628696 ATP6V0BQ99437 205 aa13.99□□□□□ -0.17
SMN2-215ENST00000628696 RNF2Q99496 336 aa13.99□□□□□ -0.17
SMN2-215ENST00000628696 ZNF2Q9BSG1 426 aaPredicted RBP13.99□□□□□ -0.17
SMN2-215ENST00000628696 C15orf62A8K5M9 175 aa13.98□□□□□ -0.17
SMN2-215ENST00000628696 YIF1AO95070 293 aa13.98□□□□□ -0.17
SMN2-215ENST00000628696 TMEM116Q8NCL8 245 aa13.98□□□□□ -0.17
SMN2-215ENST00000628696 DGCR14Q96DF8 476 aaKnown RBP13.98□□□□□ -0.17
SMN2-215ENST00000628696 TMEM56Q96MV1 263 aa13.98□□□□□ -0.17
SMN2-215ENST00000628696 RHPN1-AS1Q9BWJ2 59 aa13.98□□□□□ -0.17
SMN2-215ENST00000628696 KRTAP17-1Q9BYP8 105 aa13.98□□□□□ -0.17
SMN2-215ENST00000628696 CSTL1Q9H114 145 aa13.98□□□□□ -0.17
SMN2-215ENST00000628696 IGHV7-4-1A0A0J9YVY3 117 aa13.97□□□□□ -0.17
SMN2-215ENST00000628696 MPTX1A8MV57 137 aa13.97□□□□□ -0.17
SMN2-215ENST00000628696 CHEK1O14757 476 aa13.97□□□□□ -0.17
SMN2-215ENST00000628696 NUPL2O15504 423 aaKnown RBP13.97□□□□□ -0.17
SMN2-215ENST00000628696 PMP2P02689 132 aa13.97□□□□□ -0.17
SMN2-215ENST00000628696 CTSGP08311 255 aa13.97□□□□□ -0.17
SMN2-215ENST00000628696 DHRS11Q6UWP2 260 aa13.97□□□□□ -0.17
SMN2-215ENST00000628696 MOB3AQ96BX8 217 aa13.97□□□□□ -0.17
SMN2-215ENST00000628696 RARRES2Q99969 163 aa13.97□□□□□ -0.17
SMN2-215ENST00000628696 PRNDQ9UKY0 176 aa13.97□□□□□ -0.17
SMN2-215ENST00000628696 IGHV3OR16-13A0A075B7E8 117 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 IGHV3-74A0A0B4J1X5 117 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 XRCC3O43542 346 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 CMC4P56277 68 aaPredicted RBP13.96□□□□□ -0.17
SMN2-215ENST00000628696 NANOS2P60321 138 aaKnown RBP13.96□□□□□ -0.17
SMN2-215ENST00000628696 RELQ04864 619 aaPredicted RBP13.96□□□□□ -0.17
SMN2-215ENST00000628696 CMTM1Q8IZ96 169 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 GBGT1Q8N5D6 347 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 SLC25A46Q96AG3 418 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 MISP3Q96FF7 219 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 CMTM3Q96MX0 182 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 FKBP11Q9NYL4 201 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 FBXL17Q9UF56 701 aa13.96□□□□□ -0.17
SMN2-215ENST00000628696 MFAP4P55083 255 aa13.95□□□□□ -0.18
SMN2-215ENST00000628696 LGALS9CQ6DKI2 356 aa13.95□□□□□ -0.18
SMN2-215ENST00000628696 OR5H2Q8NGV7 314 aa13.95□□□□□ -0.18
SMN2-215ENST00000628696 GATAD1Q8WUU5 269 aa13.95□□□□□ -0.18
SMN2-215ENST00000628696 S100A16Q96FQ6 103 aaKnown RBP13.95□□□□□ -0.18
SMN2-215ENST00000628696 DBX1A6NMT0 343 aa13.94□□□□□ -0.18
SMN2-215ENST00000628696 GPR31O00270 319 aa13.94□□□□□ -0.18
SMN2-215ENST00000628696 IGHV3-48P01763 117 aa13.94□□□□□ -0.18
SMN2-215ENST00000628696 IFNA4P05014 189 aa13.94□□□□□ -0.18
SMN2-215ENST00000628696 OR1P1Q8NH06 330 aa13.94□□□□□ -0.18
SMN2-215ENST00000628696 OR11H2Q8NH07 326 aa13.94□□□□□ -0.18
SMN2-215ENST00000628696 C11orf45Q8TAV5 145 aa13.94□□□□□ -0.18
SMN2-215ENST00000628696 YTHDF1Q9BYJ9 559 aaKnown RBP13.94□□□□□ -0.18
SMN2-215ENST00000628696 TRAV14DV4A0A0A6YYC5 116 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 TAS2R46P59540 309 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 RBMS2Q15434 407 aaKnown RBP13.93□□□□□ -0.18
SMN2-215ENST00000628696 PHLDA2Q53GA4 152 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 CADM3Q8N126 398 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 OR6F1Q8NGZ6 308 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 ZNF414Q96IQ9 312 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 TSC22D3Q99576 134 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 FXYD6Q9H0Q3 95 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 Q9H521 79 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 TMEM14BQ9NUH8 114 aa13.93□□□□□ -0.18
SMN2-215ENST00000628696 C15orf61A6NNL5 157 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 I3L2K1 104 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 MT-CO2P00403 227 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 PAFAH1B2P68402 229 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 NEDD8Q15843 81 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 TMEM69Q5SWH9 247 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 TCF24Q7RTU0 167 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 OR4A16Q8NH70 328 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 PINX1Q96BK5 328 aaKnown RBP13.92□□□□□ -0.18
SMN2-215ENST00000628696 OR10C1Q96KK4 312 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 MFFQ9GZY8 342 aa13.92□□□□□ -0.18
SMN2-215ENST00000628696 DEFB4AO15263 64 aa13.91□□□□□ -0.18
SMN2-215ENST00000628696 GNG7O60262 68 aa13.91□□□□□ -0.18
SMN2-215ENST00000628696 EIF4EP06730 217 aaKnown RBP13.91□□□□□ -0.18
SMN2-215ENST00000628696 TAS2R20P59543 309 aa13.91□□□□□ -0.18
SMN2-215ENST00000628696 UBE2NLQ5JXB2 153 aa13.91□□□□□ -0.18
SMN2-215ENST00000628696 TXN2Q99757 166 aa13.91□□□□□ -0.18
SMN2-215ENST00000628696 NXF2Q9GZY0 626 aaKnown RBP13.91□□□□□ -0.18
SMN2-215ENST00000628696 DNASE2O00115 360 aaPredicted RBP13.9□□□□□ -0.18
SMN2-215ENST00000628696 TMEM127O75204 238 aa13.9□□□□□ -0.18
SMN2-215ENST00000628696 CA1P00915 261 aaPredicted RBP13.9□□□□□ -0.18
SMN2-215ENST00000628696 HLA-DMAP28067 261 aa13.9□□□□□ -0.18
SMN2-215ENST00000628696 S100GP29377 79 aa13.9□□□□□ -0.18
SMN2-215ENST00000628696 FAM90A2PQ658T7 463 aa13.9□□□□□ -0.18
SMN2-215ENST00000628696 H2BFWTQ7Z2G1 175 aa13.9□□□□□ -0.18
SMN2-215ENST00000628696 SAMD12Q8N8I0 201 aa13.9□□□□□ -0.18
SMN2-215ENST00000628696 ANAPC10Q9UM13 185 aa13.9□□□□□ -0.18
SMN2-215ENST00000628696 DNAH10Q8IVF4 4471 aa13.9□□□□□ -0.19
SMN2-215ENST00000628696 ST8SIA3O43173 380 aa13.89□□□□□ -0.19
SMN2-215ENST00000628696 NAT1P18440 290 aa13.89□□□□□ -0.19
SMN2-215ENST00000628696 PRSS3P35030 304 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 201.8 ms