RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CCDC71LQ8N9Z2 235 aa14□□□□□ -0.17
SHKBP1-202ENST00000593764 OR51S1Q8NGJ8 323 aa14□□□□□ -0.17
SHKBP1-202ENST00000593764 C5orf66Q9H5L9 145 aa14□□□□□ -0.17
SHKBP1-202ENST00000593764 ZC4H2Q9NQZ6 224 aa14□□□□□ -0.17
SHKBP1-202ENST00000593764 GPR132Q9UNW8 380 aa14□□□□□ -0.17
SHKBP1-202ENST00000593764 CCDC160A6NGH7 325 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 K7EIM0 57 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 CYB5BO43169 146 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 FOLR2P14207 255 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 GPR183P32249 361 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 PRCDQ00LT1 54 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 SURF2Q15527 256 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 DEFB114Q30KQ6 69 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 FAM106AQ4KMX7 169 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 SBSPONQ8IVN8 264 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 Q8N402 240 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 OR2C3Q8N628 320 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 SLC2A8Q9NY64 477 aa13.99□□□□□ -0.17
SHKBP1-202ENST00000593764 IGHV3-21A0A0B4J1V1 117 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 TMEM213A2RRL7 107 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 F8W735 103 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 B3GALNT1O75752 331 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 FRMD6-AS1P0C7T7 363 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 CD300EQ496F6 205 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 LCN12Q6JVE5 192 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 UNQ9165/PRO28630Q6UXU0 137 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 OR2K2Q8NGT1 345 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 OR1P1Q8NH06 330 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 SCARB1Q8WTV0 552 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 GLYATL2Q8WU03 294 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 PRRT1Q99946 306 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 TMEM222Q9H0R3 208 aa13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 C14orf166Q9Y224 244 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-202ENST00000593764 IGHV3-35A0A0C4DH35 117 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 A0A0G2JRQ6 117 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 ZNF320A2RRD8 509 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 ZNF785A8K8V0 405 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 A8MWP6 167 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 ZNF701M0R085 212 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 CDS2O95674 445 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 OR5AC1P0C628 307 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 CBLN1P23435 193 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 AKR1C2P52895 323 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 TRIM16LQ309B1 348 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 PLET1Q6UQ28 207 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 ZNF114Q8NC26 417 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 OR1L6Q8NGR2 347 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 LHFPL5Q8TAF8 219 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 CACNG8Q8WXS5 425 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 NAA60Q9H7X0 242 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 V9GYH0 126 aa13.97□□□□□ -0.17
SHKBP1-202ENST00000593764 TEX13DA0A0J9YY54 714 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 OR2T8A6NH00 312 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 CRYM-AS1A6NIL9 109 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 ST8SIA3O43173 380 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 TGOLN2O43493 480 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 ATG12O94817 140 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 IGHV4-30-4P0DP06 118 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 SPINK9Q5DT21 86 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 Q6ZRM9 215 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 TRIM63Q969Q1 353 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 ATP6V0BQ99437 205 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 ZNF436Q9C0F3 470 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 C19orf73Q9NVV2 129 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 C21orf62Q9NYP8 219 aa13.96□□□□□ -0.17
SHKBP1-202ENST00000593764 STAB2Q8WWQ8 2551 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 A8MZ25 164 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 I3L2K1 104 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 KLF9Q13886 244 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 ZNF79Q15937 498 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 TM4SF20Q53R12 229 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 CCDC190Q86UF4 302 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 DYNLRB2Q8TF09 96 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 TMEM230Q96A57 120 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 BSCL2Q96G97 398 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 CHRDL1Q9BU40 450 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 TECRQ9NZ01 308 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 SCP2D1Q9UJQ7 156 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 U3KQK5 164 aa13.95□□□□□ -0.18
SHKBP1-202ENST00000593764 INS-IGF2F8WCM5 200 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 C8orf88P0DMB2 117 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 ADMP35318 185 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 ERHP84090 104 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 PYDC2Q56P42 97 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 SPSB3Q6PJ21 355 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 SELENOHQ8IZQ5 122 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 UXS1Q8NBZ7 420 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 RRNAD1Q96FB5 475 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 ZNF414Q96IQ9 312 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 PLEKHA3Q9HB20 300 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 MCUBQ9NWR8 336 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 MLXQ9UH92 298 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 SELENOKQ9Y6D0 94 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 TENM3Q9P273 2699 aa13.94□□□□□ -0.18
SHKBP1-202ENST00000593764 CTSGP08311 255 aa13.93□□□□□ -0.18
SHKBP1-202ENST00000593764 DHODHQ02127 395 aa13.93□□□□□ -0.18
SHKBP1-202ENST00000593764 AARDQ4LEZ3 155 aa13.93□□□□□ -0.18
SHKBP1-202ENST00000593764 SGPP2Q8IWX5 399 aa13.93□□□□□ -0.18
SHKBP1-202ENST00000593764 RBPMSQ93062 196 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-202ENST00000593764 MISP3Q96FF7 219 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms