RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 UBE2CO00762 179 aa10.15□□□□□ -0.78
HDAC5-208ENST00000588419 PGLYRP1O75594 196 aaPredicted RBP10.15□□□□□ -0.78
HDAC5-208ENST00000588419 ATP6V1G2O95670 118 aa10.15□□□□□ -0.78
HDAC5-208ENST00000588419 TAS2R20P59543 309 aa10.15□□□□□ -0.78
HDAC5-208ENST00000588419 UBE2NLQ5JXB2 153 aa10.15□□□□□ -0.78
HDAC5-208ENST00000588419 WFDC3Q8IUB2 231 aa10.15□□□□□ -0.78
HDAC5-208ENST00000588419 CMTM1Q8IZ96 169 aa10.15□□□□□ -0.78
HDAC5-208ENST00000588419 MOB3AQ96BX8 217 aa10.15□□□□□ -0.78
HDAC5-208ENST00000588419 DGCR14Q96DF8 476 aaKnown RBP10.15□□□□□ -0.78
HDAC5-208ENST00000588419 S100A16Q96FQ6 103 aaKnown RBP10.15□□□□□ -0.78
HDAC5-208ENST00000588419 TMEM56Q96MV1 263 aa10.15□□□□□ -0.78
HDAC5-208ENST00000588419 C6orf62Q9GZU0 229 aaPredicted RBP10.15□□□□□ -0.78
HDAC5-208ENST00000588419 NDUFA4L2Q9NRX3 87 aa10.15□□□□□ -0.78
HDAC5-208ENST00000588419 F8W735 103 aaPredicted RBP10.14□□□□□ -0.79
HDAC5-208ENST00000588419 K7EIM0 57 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 GPR31O00270 319 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 NUPL2O15504 423 aaKnown RBP10.14□□□□□ -0.79
HDAC5-208ENST00000588419 XRCC3O43542 346 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 IGHV3-48P01763 117 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 ADMP35318 185 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 TAS2R46P59540 309 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 LSM3P62310 102 aaKnown RBP10.14□□□□□ -0.79
HDAC5-208ENST00000588419 GBGT1Q8N5D6 347 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 TMEM217Q8N7C4 229 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 SAMD12Q8N8I0 201 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 SLC25A46Q96AG3 418 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 PINX1Q96BK5 328 aaKnown RBP10.14□□□□□ -0.79
HDAC5-208ENST00000588419 RNF183Q96D59 192 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 GALNT14Q96FL9 552 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 RNF2Q99496 336 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 PRNDQ9UKY0 176 aa10.14□□□□□ -0.79
HDAC5-208ENST00000588419 KIR2DL5BA0A0G2JN68 375 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 KIR2DL5BA0A0G2JPC4 375 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 DBX1A6NMT0 343 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 HLA-DMAP28067 261 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 HRH1P35367 487 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 RELQ04864 619 aaPredicted RBP10.13□□□□□ -0.79
HDAC5-208ENST00000588419 KIR2DL5AQ8N109 375 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 RPP25LQ8N5L8 163 aaKnown RBP10.13□□□□□ -0.79
HDAC5-208ENST00000588419 TMEM116Q8NCL8 245 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 KIR2DL5BQ8NHK3 375 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 RHPN1-AS1Q9BWJ2 59 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 YTHDF1Q9BYJ9 559 aaKnown RBP10.13□□□□□ -0.79
HDAC5-208ENST00000588419 FBXL17Q9UF56 701 aa10.13□□□□□ -0.79
HDAC5-208ENST00000588419 IGHV7-4-1A0A0J9YVY3 117 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 C15orf61A6NNL5 157 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 C15orf62A8K5M9 175 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 DEDDO75618 318 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 EIF4EP06730 217 aaKnown RBP10.12□□□□□ -0.79
HDAC5-208ENST00000588419 FGF2P09038 288 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 S100GP29377 79 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 TSPAN5P62079 268 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 SPINK9Q5DT21 86 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 OR6F1Q8NGZ6 308 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 OR4A16Q8NH70 328 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 PHLDA1Q8WV24 401 aaPredicted RBP10.12□□□□□ -0.79
HDAC5-208ENST00000588419 CMTM3Q96MX0 182 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 MAP6D1Q9H9H5 199 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 FKBP11Q9NYL4 201 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 SMPXQ9UHP9 88 aa10.12□□□□□ -0.79
HDAC5-208ENST00000588419 K7EMT4 169 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 CHEK1O14757 476 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 GNG7O60262 68 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 PRSS3P35030 304 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 MFAP4P55083 255 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 DHRS11Q6UWP2 260 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 H2BFWTQ7Z2G1 175 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 TBC1D26Q86UD7 250 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 OR1P1Q8NH06 330 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 TSC22D3Q99576 134 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 FRAS1Q86XX4 4008 aa10.11□□□□□ -0.79
HDAC5-208ENST00000588419 IGHV3-66A0A0C4DH42 116 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 MPTX1A8MV57 137 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 MT-CO2P00403 227 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 CTSGP08311 255 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 NANOS2P60321 138 aaKnown RBP10.1□□□□□ -0.79
HDAC5-208ENST00000588419 RNASE12Q5GAN4 147 aaKnown RBP10.1□□□□□ -0.79
HDAC5-208ENST00000588419 CROCCP3Q8IVE0 287 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 MRGPRFQ96AM1 343 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 RARRES2Q99969 163 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 CSTL1Q9H114 145 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 TMEM14BQ9NUH8 114 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 ANAPC10Q9UM13 185 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 AGRNO00468 2067 aa10.1□□□□□ -0.79
HDAC5-208ENST00000588419 KMT2AQ03164 3969 aa10.09□□□□□ -0.79
HDAC5-208ENST00000588419 TRAV14DV4A0A0A6YYC5 116 aa10.09□□□□□ -0.79
HDAC5-208ENST00000588419 DEFB4AO15263 64 aa10.09□□□□□ -0.79
HDAC5-208ENST00000588419 ST8SIA3O43173 380 aa10.09□□□□□ -0.79
HDAC5-208ENST00000588419 CA1P00915 261 aaPredicted RBP10.09□□□□□ -0.79
HDAC5-208ENST00000588419 RPS19P39019 145 aaKnown RBP10.09□□□□□ -0.79
HDAC5-208ENST00000588419 RPL11P62913 178 aaKnown RBP10.09□□□□□ -0.79
HDAC5-208ENST00000588419 LEMD1Q68G75 181 aa10.09□□□□□ -0.79
HDAC5-208ENST00000588419 TCF24Q7RTU0 167 aa10.09□□□□□ -0.79
HDAC5-208ENST00000588419 SNX29P2Q8IUI4 249 aa10.09□□□□□ -0.79
HDAC5-208ENST00000588419 ATP6V0BQ99437 205 aa10.09□□□□□ -0.79
HDAC5-208ENST00000588419 I3L2K1 104 aa10.08□□□□□ -0.8
HDAC5-208ENST00000588419 DNASE2O00115 360 aaPredicted RBP10.08□□□□□ -0.8
HDAC5-208ENST00000588419 NAT1P18440 290 aa10.08□□□□□ -0.8
HDAC5-208ENST00000588419 PAFAH1B2P68402 229 aa10.08□□□□□ -0.8
HDAC5-208ENST00000588419 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms