RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 OR51B2Q9Y5P1 312 aa11.44□□□□□ -0.58
NME3-211ENST00000568561 KIAA1109Q2LD37 5005 aa11.44□□□□□ -0.58
NME3-211ENST00000568561 PCLOQ9Y6V0 5065 aa11.44□□□□□ -0.58
NME3-211ENST00000568561 IGHV3OR16-13A0A075B7E8 117 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 IGHV3-74A0A0B4J1X5 117 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 DBX1A6NMT0 343 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 KRASP01116 189 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 G6PCP35575 357 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 LPAR6P43657 344 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 SPSB3Q6PJ21 355 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 TMEM217Q8N7C4 229 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 GIMAP1Q8WWP7 306 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 FCAMRQ8WWV6 532 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 DNAH6Q9C0G6 4158 aa11.43□□□□□ -0.58
NME3-211ENST00000568561 FGF2P09038 288 aa11.42□□□□□ -0.58
NME3-211ENST00000568561 ATF4P18848 351 aaPredicted RBP11.42□□□□□ -0.58
NME3-211ENST00000568561 F2RP25116 425 aa11.42□□□□□ -0.58
NME3-211ENST00000568561 RFX2P48378 723 aa11.42□□□□□ -0.58
NME3-211ENST00000568561 NANOS2P60321 138 aaKnown RBP11.42□□□□□ -0.58
NME3-211ENST00000568561 HSD17B13Q7Z5P4 300 aaPredicted RBP11.42□□□□□ -0.58
NME3-211ENST00000568561 FCGR1BQ92637 280 aa11.42□□□□□ -0.58
NME3-211ENST00000568561 ZNF2Q9BSG1 426 aaPredicted RBP11.42□□□□□ -0.58
NME3-211ENST00000568561 MRPS26Q9BYN8 205 aaKnown RBP11.42□□□□□ -0.58
NME3-211ENST00000568561 FXYD6Q9H0Q3 95 aa11.42□□□□□ -0.58
NME3-211ENST00000568561 IFT46Q9NQC8 304 aa11.42□□□□□ -0.58
NME3-211ENST00000568561 SMPXQ9UHP9 88 aa11.42□□□□□ -0.58
NME3-211ENST00000568561 A0A0A6YYH2 397 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 IGHV7-4-1A0A0J9YVY3 117 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 A6NJ64 397 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 K7EMT4 169 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 PGLYRP1O75594 196 aaPredicted RBP11.41□□□□□ -0.58
NME3-211ENST00000568561 YIF1AO95070 293 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 IGHV3-48P01763 117 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 PMP2P02689 132 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 CTSGP08311 255 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 GBGT1Q8N5D6 347 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 RHPN1-AS1Q9BWJ2 59 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 DIABLOQ9NR28 239 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 FBXL17Q9UF56 701 aa11.41□□□□□ -0.58
NME3-211ENST00000568561 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 MPTX1A8MV57 137 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 CHEK1O14757 476 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 DEFB4AO15263 64 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 TGFBR1P36897 503 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 CBX5P45973 191 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 SCAND1P57086 179 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 TMEM116Q8NCL8 245 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 SLC25A46Q96AG3 418 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 MOB3AQ96BX8 217 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 DGCR14Q96DF8 476 aaKnown RBP11.4□□□□□ -0.58
NME3-211ENST00000568561 MISP3Q96FF7 219 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 RARRES2Q99969 163 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 C6orf62Q9GZU0 229 aaPredicted RBP11.4□□□□□ -0.58
NME3-211ENST00000568561 CSTL1Q9H114 145 aa11.4□□□□□ -0.58
NME3-211ENST00000568561 SNAPC5O75971 98 aa11.39□□□□□ -0.59
NME3-211ENST00000568561 ALDH3B2P48448 385 aa11.39□□□□□ -0.59
NME3-211ENST00000568561 LGALS9CQ6DKI2 356 aa11.39□□□□□ -0.59
NME3-211ENST00000568561 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 NUPL2O15504 423 aaKnown RBP11.38□□□□□ -0.59
NME3-211ENST00000568561 PRR20EP86478 221 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 PRR20CP86479 221 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 PRR20DP86480 221 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 PRR20BP86481 221 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 PRR20AP86496 221 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 NEDD8Q15843 81 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 OR5H2Q8NGV7 314 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 OR11H2Q8NH07 326 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 C11orf45Q8TAV5 145 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 BORCS5Q969J3 196 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 TMEM56Q96MV1 263 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 ATP6V0BQ99437 205 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 VCX3AQ9NNX9 186 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 PRNDQ9UKY0 176 aa11.38□□□□□ -0.59
NME3-211ENST00000568561 AGRNO00468 2067 aa11.37□□□□□ -0.59
NME3-211ENST00000568561 I3L2K1 104 aa11.37□□□□□ -0.59
NME3-211ENST00000568561 GPR31O00270 319 aa11.37□□□□□ -0.59
NME3-211ENST00000568561 XRCC3O43542 346 aa11.37□□□□□ -0.59
NME3-211ENST00000568561 RPL5P46777 297 aaKnown RBP11.37□□□□□ -0.59
NME3-211ENST00000568561 RELQ04864 619 aaPredicted RBP11.37□□□□□ -0.59
NME3-211ENST00000568561 RBMS2Q15434 407 aaKnown RBP11.37□□□□□ -0.59
NME3-211ENST00000568561 DHRS11Q6UWP2 260 aa11.37□□□□□ -0.59
NME3-211ENST00000568561 OR1P1Q8NH06 330 aa11.37□□□□□ -0.59
NME3-211ENST00000568561 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
NME3-211ENST00000568561 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
NME3-211ENST00000568561 ANAPC10Q9UM13 185 aa11.37□□□□□ -0.59
NME3-211ENST00000568561 IGHV3-66A0A0C4DH42 116 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 MT-CO2P00403 227 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 CA1P00915 261 aaPredicted RBP11.36□□□□□ -0.59
NME3-211ENST00000568561 MFAP4P55083 255 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 TAS2R20P59543 309 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 SPINK9Q5DT21 86 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 TMEM69Q5SWH9 247 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 LEMD1Q68G75 181 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 TCF24Q7RTU0 167 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 CMTM1Q8IZ96 169 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 GATAD1Q8WUU5 269 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 ST8SIA2Q92186 375 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 OR10C1Q96KK4 312 aa11.36□□□□□ -0.59
NME3-211ENST00000568561 NXF2Q9GZY0 626 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms