RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CD59P13987 128 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 PPOXP50336 477 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 PTTG1IPP53801 180 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 RASL11AQ6T310 242 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 BORCS7Q96B45 105 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 S1PR3Q99500 378 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 GAL3ST2Q9H3Q3 398 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 SLC35D1Q9NTN3 355 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 TECRQ9NZ01 308 aaKnown RBP12.88□□□□□ -0.35
COMMD4-215ENST00000566843 FOXA2Q9Y261 457 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-215ENST00000566843 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
COMMD4-215ENST00000566843 UBE2V1Q13404 147 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 CR1LQ2VPA4 569 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 SMIM21Q3B7S5 101 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 RPL39P5Q59GN2 51 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 STUMQ69YW2 141 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 CD177Q8N6Q3 437 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 C18orf32Q8TCD1 76 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 RNASE8Q8TDE3 154 aaKnown RBP12.88□□□□□ -0.35
COMMD4-215ENST00000566843 CLEC7AQ9BXN2 247 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 WNT10AQ9GZT5 417 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 COX11Q9Y6N1 276 aa12.88□□□□□ -0.35
COMMD4-215ENST00000566843 TMEM238LA0A1B0GVL6 79 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 TCL1AP56279 114 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 SLC35B1P78383 322 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 LTC4SQ16873 150 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 IBA57Q5T440 356 aaKnown RBP12.87□□□□□ -0.35
COMMD4-215ENST00000566843 MRPL54Q6P161 138 aaKnown RBP12.87□□□□□ -0.35
COMMD4-215ENST00000566843 FAM19A2Q8N3H0 131 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 PNKDQ8N490 385 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 NABP2Q9BQ15 211 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 COMMD5Q9GZQ3 224 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 IFI27L2Q9H2X8 130 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 TMEM14BQ9NUH8 114 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 AHRRA9YTQ3 701 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 GGTLC3B5MD39 225 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 RTL8BQ17RB0 113 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 BET1LQ9NYM9 111 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 ABI3Q9P2A4 366 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 GNG12Q9UBI6 72 aa12.87□□□□□ -0.35
COMMD4-215ENST00000566843 A0A1W2PRE2 83 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 ITGB1BP1O14713 200 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 ACTL6BO94805 426 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 ACP1P24666 158 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 LOXL3P58215 753 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 KLF5Q13887 457 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-215ENST00000566843 FAM234AQ9H0X4 552 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 COL27A1Q8IZC6 1860 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-215ENST00000566843 TRAV9-2A0A087WT02 112 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 F2RL2O00254 374 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 USF1P22415 310 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-215ENST00000566843 TBR1Q16650 682 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 ZNF738Q8NE65 137 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 OR4S2Q8NH73 311 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 C19orf24Q9BVV8 132 aa12.86□□□□□ -0.35
COMMD4-215ENST00000566843 ZNF331Q9NQX6 463 aaPredicted RBP12.86□□□□□ -0.35
COMMD4-215ENST00000566843 EP300Q09472 2414 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-215ENST00000566843 CFAP54Q96N23 3096 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 DNAJC13O75165 2243 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 IGHV1-2P23083 117 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 HINT1P49773 126 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-215ENST00000566843 ZNF134P52741 427 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 SLAQ13239 276 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 INO80CQ6PI98 192 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-215ENST00000566843 MBD6Q96DN6 1003 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 ENY2Q9NPA8 101 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 TRAV34A0A0B4J273 112 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 NTF3P20783 257 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 PRDX2P32119 198 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 MEOX1P50221 254 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 MAJINQ3KP22 176 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 UNQ5815/PRO19632Q6UWF5 114 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 SPACA3Q8IXA5 215 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 OR8B3Q8NGG8 313 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 OR8B2Q96RD0 313 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 SPRY4Q9C004 299 aa12.85□□□□□ -0.35
COMMD4-215ENST00000566843 OTOGLQ3ZCN5 2332 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 IGHV1-69-2A0A0G2JMI3 117 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 IGLC7A0M8Q6 106 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 H0YJW9 148 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 TMEM11P17152 192 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 EDDM3AQ14507 147 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 OR4A47Q6IF82 309 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 LCN12Q6JVE5 192 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 C1orf229Q6ZS94 237 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-215ENST00000566843 OR4F17Q8NGA8 305 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 C22orf15Q8WYQ4 148 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 PLPPR2Q96GM1 343 aa12.84□□□□□ -0.35
COMMD4-215ENST00000566843 IGHV2OR16-5A0A0B4J2B6 119 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 CDKN1BP46527 198 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 TAS2R45P59539 299 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 TNXAQ16473 311 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 POU2AF1Q16633 256 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 FAM231DQ6ZW35 169 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 ATOH7Q8N100 152 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 MUC15Q8N387 334 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 TUBG2Q9NRH3 451 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 IDI2-AS1Q9NZ38 188 aa12.83□□□□□ -0.35
COMMD4-215ENST00000566843 FAM181BA6NEQ2 426 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms