RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RETNQ9HD89 108 aa11.22□□□□□ -0.61
SPG7-210ENST00000564409 C15orf62A8K5M9 175 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 FCGR2BP31994 310 aaPredicted RBP11.21□□□□□ -0.61
SPG7-210ENST00000564409 RORCP51449 518 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 RELQ04864 619 aaPredicted RBP11.21□□□□□ -0.61
SPG7-210ENST00000564409 PHLDA2Q53GA4 152 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 H2BFWTQ7Z2G1 175 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 TBC1D26Q86UD7 250 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 OR4A16Q8NH70 328 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 C15orf40Q8WUR7 153 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 AP3S1Q92572 193 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 ZNF486Q96H40 463 aaPredicted RBP11.21□□□□□ -0.61
SPG7-210ENST00000564409 SEC22AQ96IW7 307 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 NSG2Q9Y328 171 aa11.21□□□□□ -0.61
SPG7-210ENST00000564409 RYR2Q92736 4967 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 IGHV3-35A0A0C4DH35 117 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 K7EIM0 57 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 UBE2CO00762 179 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 JTBO76095 146 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 TBPP20226 339 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 MFAP2P55001 183 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 APOC4P55056 127 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 NCS1P62166 190 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 SNX29P2Q8IUI4 249 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 ZNF114Q8NC26 417 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 TP53TG1Q9Y2A0 90 aa11.2□□□□□ -0.62
SPG7-210ENST00000564409 KIR2DL5BA0A0G2JN68 375 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 KIR2DL5BA0A0G2JPC4 375 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 OR4C46A6NHA9 309 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 NUPL2O15504 423 aaKnown RBP11.19□□□□□ -0.62
SPG7-210ENST00000564409 ATG12O94817 140 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 CTSGP08311 255 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 ELK1P19419 428 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 MFAP4P55083 255 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 CMC4P56277 68 aaPredicted RBP11.19□□□□□ -0.62
SPG7-210ENST00000564409 RND3P61587 244 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 HSPE1P61604 102 aaKnown RBP11.19□□□□□ -0.62
SPG7-210ENST00000564409 VBP1P61758 197 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 PRCDQ00LT1 54 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 Q56UQ5 140 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 Q6ZWC4 215 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 KIR2DL5AQ8N109 375 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 KIR2DL5BQ8NHK3 375 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 CHRDL1Q9BU40 450 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 CSMD3Q7Z407 3707 aa11.19□□□□□ -0.62
SPG7-210ENST00000564409 F8W735 103 aaPredicted RBP11.18□□□□□ -0.62
SPG7-210ENST00000564409 HPGDSO60760 199 aa11.18□□□□□ -0.62
SPG7-210ENST00000564409 CD5P06127 495 aa11.18□□□□□ -0.62
SPG7-210ENST00000564409 ADMP35318 185 aa11.18□□□□□ -0.62
SPG7-210ENST00000564409 ERHP84090 104 aaKnown RBP11.18□□□□□ -0.62
SPG7-210ENST00000564409 ARRDC1Q8N5I2 433 aa11.18□□□□□ -0.62
SPG7-210ENST00000564409 UBAC2Q8NBM4 344 aa11.18□□□□□ -0.62
SPG7-210ENST00000564409 LYSTQ99698 3801 aa11.18□□□□□ -0.62
SPG7-210ENST00000564409 OVOL2Q9BRP0 275 aa11.18□□□□□ -0.62
SPG7-210ENST00000564409 C20orf24Q9BUV8 137 aa11.18□□□□□ -0.62
SPG7-210ENST00000564409 FAM25AB3EWG3 89 aa11.17□□□□□ -0.62
SPG7-210ENST00000564409 FAM25CB3EWG5 89 aa11.17□□□□□ -0.62
SPG7-210ENST00000564409 FAM25GB3EWG6 89 aa11.17□□□□□ -0.62
SPG7-210ENST00000564409 I3L2K1 104 aa11.17□□□□□ -0.62
SPG7-210ENST00000564409 ZNF182P17025 639 aaPredicted RBP11.17□□□□□ -0.62
SPG7-210ENST00000564409 RNASE10Q5GAN6 216 aaKnown RBP11.17□□□□□ -0.62
SPG7-210ENST00000564409 OR10C1Q96KK4 312 aa11.17□□□□□ -0.62
SPG7-210ENST00000564409 SMPXQ9UHP9 88 aa11.17□□□□□ -0.62
SPG7-210ENST00000564409 SELENOKQ9Y6D0 94 aa11.17□□□□□ -0.62
SPG7-210ENST00000564409 DNAH1Q9P2D7 4330 aa11.17□□□□□ -0.62
SPG7-210ENST00000564409 IGHV3-21A0A0B4J1V1 117 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 DBX1A6NMT0 343 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 INS-IGF2F8WCM5 200 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 B3GALNT1O75752 331 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 IGKV1-39P01597 117 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 IGKV1D-39P04432 117 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 ATF4P18848 351 aaPredicted RBP11.16□□□□□ -0.62
SPG7-210ENST00000564409 BMI1P35226 326 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 LHFPL1Q86WI0 220 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 ZFAND1Q8TCF1 268 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 MRGPRFQ96AM1 343 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 MISP3Q96FF7 219 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 C6orf62Q9GZU0 229 aaPredicted RBP11.16□□□□□ -0.62
SPG7-210ENST00000564409 MTFP1Q9UDX5 166 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 SACSQ9NZJ4 4579 aa11.16□□□□□ -0.62
SPG7-210ENST00000564409 IGHV7-4-1A0A0J9YVY3 117 aa11.15□□□□□ -0.62
SPG7-210ENST00000564409 CORTO00230 105 aa11.15□□□□□ -0.62
SPG7-210ENST00000564409 GABARAPO95166 117 aa11.15□□□□□ -0.62
SPG7-210ENST00000564409 PGAM2P15259 253 aa11.15□□□□□ -0.62
SPG7-210ENST00000564409 STPG3Q8N7X2 389 aa11.15□□□□□ -0.62
SPG7-210ENST00000564409 TMEM116Q8NCL8 245 aa11.15□□□□□ -0.62
SPG7-210ENST00000564409 GALNT14Q96FL9 552 aa11.15□□□□□ -0.62
SPG7-210ENST00000564409 GINS3Q9BRX5 216 aa11.15□□□□□ -0.62
SPG7-210ENST00000564409 NXF2Q9GZY0 626 aaKnown RBP11.15□□□□□ -0.62
SPG7-210ENST00000564409 M0QYG6 137 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 CHEK1O14757 476 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 SPRY2O43597 315 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 GNG7O60262 68 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 MT-CO2P00403 227 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 CTSDP07339 412 aaPredicted RBP11.14□□□□□ -0.63
SPG7-210ENST00000564409 SNCAP37840 140 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 NPBWR1P48145 328 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 SUB1P53999 127 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPG7-210ENST00000564409 PIGPP57054 158 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms