RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GAMTQ14353 236 aa15.38■□□□□ 0.05
SMPD3-203ENST00000563226 SPATA31B1PQ5VZV4 182 aa15.38■□□□□ 0.05
SMPD3-203ENST00000563226 IGFBPL1Q8WX77 278 aa15.38■□□□□ 0.05
SMPD3-203ENST00000563226 TMEM8BA6NDV4 472 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 INS-IGF2F8WCM5 200 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 ERHP84090 104 aaKnown RBP15.37■□□□□ 0.05
SMPD3-203ENST00000563226 PRR20EP86478 221 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 PRR20CP86479 221 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 PRR20DP86480 221 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 PRR20BP86481 221 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 PRR20AP86496 221 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 KLRD1Q13241 179 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 ABHD5Q8WTS1 349 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 RPEQ96AT9 228 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 TUBA4BQ9H853 241 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 MANBALQ9NQG1 85 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 ASH1LQ9NR48 2969 aaKnown RBP15.37■□□□□ 0.05
SMPD3-203ENST00000563226 LOC105371242A0A075B767 164 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 A0A1W2PN81 502 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 hCG_1809904A0A1W2PP81 198 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 A0A1W2PPI3 338 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 A0A1W2PR64 198 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 A0A1W2PRV1 198 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 CHRNA7P36544 502 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 RPL29P47914 159 aaKnown RBP15.37■□□□□ 0.05
SMPD3-203ENST00000563226 CD69Q07108 199 aa15.37■□□□□ 0.05
SMPD3-203ENST00000563226 IGSF10Q6WRI0 2623 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 REG1AP05451 166 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 CRYGBP07316 175 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 LINC00869P0C866 280 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 ARL14EPLP0DKL9 152 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 ATP5IP56385 69 aaPredicted RBP15.36■□□□□ 0.05
SMPD3-203ENST00000563226 PSG5Q15238 335 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 TMEM144Q7Z5S9 345 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 FAM24BQ8N5W8 94 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 OR4F5Q8NH21 305 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 OR4F4Q96R69 305 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 SEPSECSQ9HD40 501 aaKnown RBP15.36■□□□□ 0.05
SMPD3-203ENST00000563226 KCNIP2Q9NS61 270 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 SLC45A2Q9UMX9 530 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 A6NNC1 897 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 GATA2P23769 480 aaPredicted RBP15.36■□□□□ 0.05
SMPD3-203ENST00000563226 GPR6P46095 362 aaPredicted RBP15.36■□□□□ 0.05
SMPD3-203ENST00000563226 UBE2G2P60604 165 aa15.36■□□□□ 0.05
SMPD3-203ENST00000563226 AMMECR1Q9Y4X0 333 aaPredicted RBP15.36■□□□□ 0.05
SMPD3-203ENST00000563226 OR2C1O95371 312 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 STAG3L2P0CL84 134 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 STAG3L3P0CL85 134 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 RAB31Q13636 194 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 PRSS8Q16651 343 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 HCP5Q6MZN7 132 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 SLC16A13Q7RTY0 426 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 TEX45Q8NA69 505 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 OR2T6Q8NHC8 308 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 MLXQ9UH92 298 aa15.35■□□□□ 0.05
SMPD3-203ENST00000563226 OR10J1P30954 320 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 ZNF674Q2M3X9 581 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 TMEM249Q2WGJ8 235 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 RPUSD4Q96CM3 377 aaKnown RBP15.34■□□□□ 0.05
SMPD3-203ENST00000563226 YPEL4Q96NS1 127 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 FNDC4Q9H6D8 234 aaPredicted RBP15.34■□□□□ 0.05
SMPD3-203ENST00000563226 SDF2L1Q9HCN8 221 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 SIGLEC9Q9Y336 463 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 AKAP6Q13023 2319 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 ZFP36P26651 326 aaKnown RBP15.34■□□□□ 0.05
SMPD3-203ENST00000563226 ATP5G3P48201 142 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 SSBP2P81877 361 aaPredicted RBP15.34■□□□□ 0.05
SMPD3-203ENST00000563226 SPNS3Q6ZMD2 512 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 C19orf35Q6ZS72 473 aa15.34■□□□□ 0.05
SMPD3-203ENST00000563226 ACACBO00763 2458 aa15.33■□□□□ 0.05
SMPD3-203ENST00000563226 A0A1W2PRD5 423 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 A0A1W2PRF3 423 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 A0A1W2PRM7 423 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 IGLC7A0M8Q6 106 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 IGHV3-48P01763 117 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 APELAP0DMC3 54 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 FLI1Q01543 452 aaPredicted RBP15.33■□□□□ 0.04
SMPD3-203ENST00000563226 TNXAQ16473 311 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 TPTE2P1Q5T6R2 138 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 ZFP82Q8N141 532 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 OR11H6Q8NGC7 330 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 SMIM7Q9BQ49 75 aa15.33■□□□□ 0.04
SMPD3-203ENST00000563226 METTL1Q9UBP6 276 aaKnown RBP15.33■□□□□ 0.04
SMPD3-203ENST00000563226 A0A087WWC5 75 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 C11orf94C9JXX5 98 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 TMEM250H0YL14 139 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 M0R1W7 72 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 TIMM23O14925 209 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 MT-ND4LP03901 98 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 NPPCP23582 126 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 KIAA0141Q14154 515 aaPredicted RBP15.32■□□□□ 0.04
SMPD3-203ENST00000563226 LHFPL4Q7Z7J7 247 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 MMD2Q8IY49 270 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 ACY3Q96HD9 319 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 PARLQ9H300 379 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 FOXH1O75593 365 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 ACTL6BO94805 426 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 AREGP15514 252 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 SMUG1Q53HV7 270 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 ZNF343Q6P1L6 599 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms