RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ZNF71Q9NQZ8 489 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 C1RLQ9NZP8 487 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 TRAPPC2LQ9UL33 140 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 KCNS2Q9ULS6 477 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 PROCRQ9UNN8 238 aa11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 INTS1Q8N201 2190 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-220ENST00000560998 TRAV38-1A0A0B4J264 116 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 LOC400499M0QZD8 3231 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 ZNF292O60281 2723 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 HAND1O96004 215 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 IGLL1P15814 213 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 PLA2G5P39877 138 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 UBE2G1P62253 170 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 IGFL3Q6UXB1 125 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 SEM1Q6ZVN7 128 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 CXXC4Q9H2H0 198 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 MBNL3Q9NUK0 354 aaKnown RBP11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 DMXL1Q9Y485 3027 aa11.52□□□□□ -0.56
RABGGTA-220ENST00000560998 PRR14LQ5THK1 2151 aa11.52□□□□□ -0.57
RABGGTA-220ENST00000560998 FAM181BA6NEQ2 426 aa11.52□□□□□ -0.57
RABGGTA-220ENST00000560998 RPL31P62899 125 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-220ENST00000560998 VHLLQ6RSH7 139 aa11.52□□□□□ -0.57
RABGGTA-220ENST00000560998 PRSS33Q8NF86 280 aa11.52□□□□□ -0.57
RABGGTA-220ENST00000560998 IGHV1-18A0A0C4DH31 117 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 M0R1X1 148 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 RAB29O14966 203 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 TIMM8AO60220 97 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 REG1BP48304 166 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 CEBPDP49716 269 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 Q6ZR03 302 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 ZNF826PQ6ZT77 177 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 BHLHA15Q7RTS1 189 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 OR52L2PQ8NGH6 319 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 WIPF2Q8TF74 440 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 NINJ1Q92982 152 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 IL19Q9UHD0 177 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 FZR1Q9UM11 496 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 GTF3C1Q12789 2109 aa11.51□□□□□ -0.57
RABGGTA-220ENST00000560998 ODAMA1E959 279 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 CORTO00230 105 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 WNT9BO14905 357 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 CD5LO43866 347 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 HLA-DRB1P01911 266 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 APCSP02743 223 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 NTF3P20783 257 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 KLF5Q13887 457 aaPredicted RBP11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 BVES-AS1Q5T3Y7 98 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 FAM162BQ5T6X4 162 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 ATOH7Q8N100 152 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 DRAM1Q8N682 238 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 UBALD1Q8TB05 177 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 TNFRSF14Q92956 283 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 GAGE12BA1L429 117 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 PSPNO60542 156 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 ZG16O60844 167 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 HSBP1O75506 76 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 DEFA4P12838 97 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 FABP6P51161 128 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 MAJINQ3KP22 176 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 MBNL2Q5VZF2 373 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 OR2D2Q9H210 308 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 KCNIP1Q9NZI2 227 aa11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 YTHDF2Q9Y5A9 579 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-220ENST00000560998 TMEM30CPA0ZSE6 113 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 ISLRO14498 428 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 TM4SF5O14894 197 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 NPY1RP25929 384 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 GCHFRP30047 84 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 EDDM3BP56851 147 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 CATR1Q13166 79 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 PRAMEF6Q5VXH4 476 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 ACP7Q6ZNF0 438 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 FAM169BQ8N8A8 192 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 SLC25A15Q9Y619 301 aa11.49□□□□□ -0.57
RABGGTA-220ENST00000560998 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 CLDN14O95500 239 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 GNG4P50150 75 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 HOXA4Q00056 320 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 SMIM21Q3B7S5 101 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 KIAA1644Q3SXP7 199 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 MPV17L2Q567V2 206 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 GCSAMLQ5JQS6 135 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 SLC35E4Q6ICL7 350 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 LCN12Q6JVE5 192 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 WDR82Q6UXN9 313 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 Q6ZS92 163 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 FAM19A2Q8N3H0 131 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 PRR7Q8TB68 274 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 MEGF9Q9H1U4 602 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 SAP30LQ9HAJ7 183 aa11.48□□□□□ -0.57
RABGGTA-220ENST00000560998 WASHC3Q9Y3C0 194 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms