RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 C10orf55Q5SWW7 151 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 CLEC2AQ6UVW9 174 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 COMMD1Q8N668 190 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 OR10W1Q8NGF6 305 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 PERPQ96FX8 193 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 NPCDR1Q9BY65 106 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 VSIRQ9H7M9 311 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 ZNF430Q9H8G1 570 aaPredicted RBP6.68□□□□□ -1.34
RAB5B-210ENST00000553116 TPSG1Q9NRR2 321 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 RPRMQ9NS64 109 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 A6NJY4 79 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 J3KRW8 73 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 TIMM23O14925 209 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 CEBPGP53567 150 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 DVL1P1P54792 670 aaPredicted RBP6.68□□□□□ -1.34
RAB5B-210ENST00000553116 HABP2Q14520 560 aaPredicted RBP6.68□□□□□ -1.34
RAB5B-210ENST00000553116 PEA15Q15121 130 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 TMEM41BQ5BJD5 291 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 DPPA3Q6W0C5 159 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 OR4A5Q8NH83 315 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 TMEM167AQ8TBQ9 72 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 RITA1Q96K30 269 aa6.68□□□□□ -1.34
RAB5B-210ENST00000553116 METTL1Q9UBP6 276 aaKnown RBP6.68□□□□□ -1.34
RAB5B-210ENST00000553116 A0A1W2PN81 502 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 SFTA3P0C7M3 94 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 APELAP0DMC3 54 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 S100PP25815 95 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 CNTFRP26992 372 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 CHRNA7P36544 502 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 FGF8P55075 233 aaPredicted RBP6.67□□□□□ -1.34
RAB5B-210ENST00000553116 HAGHQ16775 308 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 TPTE2P1Q5T6R2 138 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 ZNF787Q6DD87 383 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 LHFPL4Q7Z7J7 247 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 PARD6GQ9BYG4 376 aaPredicted RBP6.67□□□□□ -1.34
RAB5B-210ENST00000553116 OR51M1Q9H341 326 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 HMGB3O15347 200 aaKnown RBP6.67□□□□□ -1.34
RAB5B-210ENST00000553116 FOXH1O75593 365 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 TOX4O94842 621 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 S100A7P31151 101 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 MMDQ15546 238 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 MMD2Q8IY49 270 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 OR11H6Q8NGC7 330 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 IGFBPL1Q8WX77 278 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 SLC25A22Q9H936 323 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 TIMM9Q9Y5J7 89 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 KPTNQ9Y664 436 aa6.67□□□□□ -1.34
RAB5B-210ENST00000553116 ANKRD17O75179 2603 aaKnown RBP6.67□□□□□ -1.34
RAB5B-210ENST00000553116 IGHV2-70DA0A0C4DH43 119 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 BTBD17A6NE02 478 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 IGLV2-23P01705 113 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 MBP02144 154 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 OR13C7P0DN81 318 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 RAB5BP61020 215 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 MISP3Q96FF7 219 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 SLC39A9Q9NUM3 307 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 MAP1LC3B2A6NCE7 125 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 IGKV1D-33P01593 117 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 IGKV1-33P01594 117 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 REG1AP05451 166 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 IL6RP08887 468 aaPredicted RBP6.66□□□□□ -1.34
RAB5B-210ENST00000553116 CD24P25063 80 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 DLK1P80370 383 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 RAB31Q13636 194 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 ACSM6Q6P461 480 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 MRPL41Q8IXM3 137 aaKnown RBP6.66□□□□□ -1.34
RAB5B-210ENST00000553116 KIR3DL3Q8N743 410 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 OR10G4Q8NGN3 311 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 OR10G9Q8NGN4 311 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 OR10G7Q8NGN6 311 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 LYPD6BQ8NI32 183 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 TMEM170AQ8WVE7 144 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 NRGNQ92686 78 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 RCC1LQ96I51 464 aaKnown RBP6.66□□□□□ -1.34
RAB5B-210ENST00000553116 MAP1LC3BQ9GZQ8 125 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 FBXL15Q9H469 300 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 NPVFQ9HCQ7 196 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 NDUFA4L2Q9NRX3 87 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 KIAA1456Q9P272 454 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 GNG13Q9P2W3 67 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 UBR5O95071 2799 aaPredicted RBP6.66□□□□□ -1.34
RAB5B-210ENST00000553116 A0A1W2PPI3 338 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 ZFP92A6NM28 416 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 TCAPO15273 167 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 MPDU1O75352 247 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 CNIH1O95406 144 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 SNRNP70P08621 437 aaKnown RBP6.66□□□□□ -1.34
RAB5B-210ENST00000553116 RPL27AP46776 148 aaKnown RBP6.66□□□□□ -1.34
RAB5B-210ENST00000553116 SUB1P53999 127 aaKnown RBP eCLIP6.66□□□□□ -1.34
RAB5B-210ENST00000553116 CCL20P78556 96 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 VWC2Q2TAL6 325 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 ETFRF1Q6IPR1 90 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 CCDC144NLQ6NUI1 221 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 TREML4Q6UXN2 200 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 SVBPQ8N300 66 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 TEX45Q8NA69 505 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 SSMEM1Q8WWF3 244 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 C14orf144Q96I85 54 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 GGACTQ9BVM4 153 aa6.66□□□□□ -1.34
RAB5B-210ENST00000553116 WDR83OSQ9Y284 106 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms