RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TPRA1Q86W33 373 aa3.64□□□□□ -1.83
SCAF11-214ENST00000550893 COMMD1Q8N668 190 aa3.64□□□□□ -1.83
SCAF11-214ENST00000550893 LFNGQ8NES3 379 aa3.64□□□□□ -1.83
SCAF11-214ENST00000550893 OR11H1Q8NG94 326 aa3.64□□□□□ -1.83
SCAF11-214ENST00000550893 MRAPQ8TCY5 172 aa3.64□□□□□ -1.83
SCAF11-214ENST00000550893 ZNF430Q9H8G1 570 aaPredicted RBP3.64□□□□□ -1.83
SCAF11-214ENST00000550893 CHMP1AQ9HD42 196 aaPredicted RBP3.64□□□□□ -1.83
SCAF11-214ENST00000550893 SLC35D1Q9NTN3 355 aa3.64□□□□□ -1.83
SCAF11-214ENST00000550893 KCNIP1Q9NZI2 227 aa3.64□□□□□ -1.83
SCAF11-214ENST00000550893 METTL1Q9UBP6 276 aaKnown RBP3.64□□□□□ -1.83
SCAF11-214ENST00000550893 ANXA10Q9UJ72 324 aa3.64□□□□□ -1.83
SCAF11-214ENST00000550893 BLOC1S6Q9UL45 172 aa3.64□□□□□ -1.83
SCAF11-214ENST00000550893 FOXA2Q9Y261 457 aaPredicted RBP3.64□□□□□ -1.83
SCAF11-214ENST00000550893 RBMX2Q9Y388 322 aaKnown RBP3.64□□□□□ -1.83
SCAF11-214ENST00000550893 PKD1P98161 4303 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
SCAF11-214ENST00000550893 AGRNO00468 2067 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 LOC100506127A0A0U1RQW1 187 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 IGLC7A0M8Q6 106 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 RBBP9O75884 186 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 CRYZL1O95825 349 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 IGLV1-51P01701 117 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 IGHV3-11P01762 117 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 AREGP15514 252 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 MYL9P24844 172 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 SLC6A1P30531 599 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 ARHGDIBP52566 201 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 UBE2KP61086 200 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 LSM3P62310 102 aaKnown RBP3.63□□□□□ -1.83
SCAF11-214ENST00000550893 ZNF616Q08AN1 781 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 POU2AF1Q16633 256 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 TIMM50Q3ZCQ8 353 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 AKIRIN2Q53H80 203 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 OR2B11Q5JQS5 317 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 FFAR4Q5NUL3 377 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 ZNF818PQ6ZRF7 136 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 PPP1R27Q86WC6 154 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 HOGA1Q86XE5 327 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 ZNF645Q8N7E2 425 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 GPX8Q8TED1 209 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 SRSF12Q8WXF0 261 aaKnown RBP3.63□□□□□ -1.83
SCAF11-214ENST00000550893 ARPC1AQ92747 370 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 SLC25A46Q96AG3 418 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 CLCC1Q96S66 551 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 RNF5Q99942 180 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 B9D2Q9BPU9 175 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 RASL11BQ9BPW5 248 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 FUNDC2Q9BWH2 189 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 ATG5Q9H1Y0 275 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 DCSTAMPQ9H295 470 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 VCX3BQ9H321 246 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 CCL28Q9NRJ3 127 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 ABRACLQ9P1F3 81 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 CACNG5Q9UF02 275 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 ETV7Q9Y603 341 aa3.63□□□□□ -1.83
SCAF11-214ENST00000550893 TRAV18A0A075B6X5 111 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 IGKV3D-20A0A0C4DH25 116 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 MFSD2BA6NFX1 497 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 A8MZ25 164 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 J3QRK9 145 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 PDCD5O14737 125 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 S1PR2O95136 353 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 PPYP01298 95 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 ZNF735P0CB33 412 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 SPNP16150 400 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 ELK1P19419 428 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 VDAC1P21796 283 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 GNRHRP30968 328 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 MC5RP33032 325 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 SERPINB10P48595 397 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 TAS2R20P59543 309 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 VBP1P61758 197 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 KLF5Q13887 457 aaPredicted RBP3.62□□□□□ -1.83
SCAF11-214ENST00000550893 FXYD3Q14802 87 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 SPCS2Q15005 226 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 IDNKQ5T6J7 187 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 AADACL3Q5VUY0 350 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 ZNF343Q6P1L6 599 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 CNIH2Q6PI25 160 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 UNQ5815/PRO19632Q6UWF5 114 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 LINC00322Q6ZN03 302 aaPredicted RBP3.62□□□□□ -1.83
SCAF11-214ENST00000550893 LHFPL1Q86WI0 220 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 POC5Q8NA72 575 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 BEST4Q8NFU0 473 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 TSPAN14Q8NG11 270 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 OR4D10Q8NGI6 311 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 OR1N2Q8NGR9 330 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 GRPEL2Q8TAA5 225 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 TMEM167AQ8TBQ9 72 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 CMTM3Q96MX0 182 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 MS4A10Q96PG2 267 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 WFDC10AQ9H1F0 79 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 SLA2Q9H6Q3 261 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 MGAT4AQ9UM21 535 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 VSIG4Q9Y279 399 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 PYGO1Q9Y3Y4 419 aa3.62□□□□□ -1.83
SCAF11-214ENST00000550893 IGLV11-55A0A075B6I3 123 aa3.61□□□□□ -1.83
SCAF11-214ENST00000550893 A0A0A6YYH2 397 aa3.61□□□□□ -1.83
SCAF11-214ENST00000550893 A0A0G2JRQ6 117 aa3.61□□□□□ -1.83
SCAF11-214ENST00000550893 TMEM213A2RRL7 107 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms