RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 S1PR3Q99500 378 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 ABI3Q9P2A4 366 aa11.29□□□□□ -0.6
HDAC7-228ENST00000548938 LINC00869P0C866 280 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 ASPHD1Q5U4P2 390 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 FAM90A1Q86YD7 464 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 IFI27L2Q9H2X8 130 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 SPRR3Q9UBC9 169 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 CDC42EP3Q9UKI2 254 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 LAMTOR2Q9Y2Q5 125 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 DMXL1Q9Y485 3027 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 C15orf61A6NNL5 157 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 GGTLC3B5MD39 225 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 CA1P00915 261 aaPredicted RBP11.28□□□□□ -0.6
HDAC7-228ENST00000548938 RAB31Q13636 194 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 MAJINQ3KP22 176 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 OSTCQ9NRP0 149 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 IL19Q9UHD0 177 aa11.28□□□□□ -0.6
HDAC7-228ENST00000548938 SPAARA0A1B0GVQ0 90 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 DPRXA6NFQ7 191 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 TIMM8AO60220 97 aaPredicted RBP11.27□□□□□ -0.61
HDAC7-228ENST00000548938 AGFG2O95081 481 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 AMY1AP04745 511 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 TMEM11P17152 192 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 NTF3P20783 257 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 TIGITQ495A1 244 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 LRRC29Q8WV35 223 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 LEAP2Q969E1 77 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 ZNF503Q96F45 646 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 HINT2Q9BX68 163 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 JPT1Q9UK76 154 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 IGLV2-8P01709 118 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 MGST1P10620 155 aaKnown RBP11.27□□□□□ -0.61
HDAC7-228ENST00000548938 GATA2P23769 480 aaPredicted RBP11.27□□□□□ -0.61
HDAC7-228ENST00000548938 PRRX1P54821 245 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 ARG2P78540 354 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 RPL19P84098 196 aaKnown RBP11.27□□□□□ -0.61
HDAC7-228ENST00000548938 Q6ZVH6 145 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 TSKUQ8WUA8 353 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 GCM1Q9NP62 436 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 DUSP13Q9UII6 198 aa11.27□□□□□ -0.61
HDAC7-228ENST00000548938 OR7C2O60412 319 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 MMP23AO75900 390 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 PRDX2P32119 198 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 FABP6P51161 128 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 TCF15Q12870 199 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 LCN12Q6JVE5 192 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 TRAT1Q6PIZ9 186 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 TUBG2Q9NRH3 451 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 SERTAD4Q9NUC0 356 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 SLC25A10Q9UBX3 287 aaPredicted RBP11.26□□□□□ -0.61
HDAC7-228ENST00000548938 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 FTH1P19P0C7X4 201 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 IBA57Q5T440 356 aaKnown RBP11.26□□□□□ -0.61
HDAC7-228ENST00000548938 OR4A47Q6IF82 309 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 FAM214BQ7L5A3 538 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 NHLRC2Q8NBF2 726 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 DDB2Q92466 427 aa11.26□□□□□ -0.61
HDAC7-228ENST00000548938 ZNF292O60281 2723 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 ZFHX2Q9C0A1 2572 aaPredicted RBP11.25□□□□□ -0.61
HDAC7-228ENST00000548938 YLPM1P49750 1951 aaKnown RBP11.25□□□□□ -0.61
HDAC7-228ENST00000548938 ISLRO14498 428 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 GNG10P50151 68 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 LOXL3P58215 753 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 SLAQ13239 276 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 RNFT1Q5M7Z0 435 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 NEUROG1Q92886 237 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 NCOR1P1Q9H4R4 102 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 ARL2-SNX15V9GYD0 113 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 IGKV1OR2-108A0A075B7D4 117 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 SMIM27A0A1W2PRY6 76 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 PRR33A8MZF0 331 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 APCSP02743 223 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 HSPE1P61604 102 aaKnown RBP11.25□□□□□ -0.61
HDAC7-228ENST00000548938 ENY2Q9NPA8 101 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 TMEM14BQ9NUH8 114 aa11.25□□□□□ -0.61
HDAC7-228ENST00000548938 KLF13Q9Y2Y9 288 aaPredicted RBP11.25□□□□□ -0.61
HDAC7-228ENST00000548938 IGKV1D-17A0A075B6S4 117 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 CCL25O15444 150 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 HINT1P49773 126 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-228ENST00000548938 COX19Q49B96 90 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 IGF2BP2-AS1Q96M15 143 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 SSBP3Q9BWW4 388 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-228ENST00000548938 PLEKHA3Q9HB20 300 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 ASCL3Q9NQ33 180 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 FOXA2Q9Y261 457 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-228ENST00000548938 CFAP47Q6ZTR5 3102 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 MUC6Q6W4X9 2439 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 IGHV3OR15-7A0A075B7D8 119 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 C20orf202A1L168 122 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 ATP1A1-AS1Q5TC04 95 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 ZNF439Q8NDP4 499 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 C18orf32Q8TCD1 76 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 FAM168AQ92567 244 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 BORCS7Q96B45 105 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 CLEC7AQ9BXN2 247 aa11.24□□□□□ -0.61
HDAC7-228ENST00000548938 SLC35D1Q9NTN3 355 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms