RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SLC25A17O43808 307 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 SAA1P0DJI8 122 aaPredicted RBP11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 GCHFRP30047 84 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 BATFQ16520 125 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 IDI2-AS1Q9NZ38 188 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 TIMM9Q9Y5J7 89 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 IGHV2-70P01814 119 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 P0C879 139 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 RHOBP62745 196 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 OR10G8Q8NGN5 311 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 MISP3Q96FF7 219 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 SFRP2Q96HF1 295 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 FAM90A27PA6NNH2 459 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 C16orf97H3BN30 126 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 MKRN2OSH3BPM6 223 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 RAB7AP51149 207 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 NUBP1P53384 320 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 BAGE3Q86Y29 109 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 BAGE2Q86Y30 109 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 OR8I2Q8N0Y5 310 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 RBMXL3Q8N7X1 1067 aaKnown RBP11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 ZCCHC14Q8WYQ9 949 aaKnown RBP11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 NABP2Q9BQ15 211 aa11.2□□□□□ -0.62
PRPF40B-209ENST00000548825 C15orf61A6NNL5 157 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 CXorf1O96002 111 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 FAM87AP0C7U9 286 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 GUSBP1Q15486 140 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 GAFA1Q96PS6 74 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 SAMD10Q9BYL1 202 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 TRBV24-1A0A075B6N3 115 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 FCN1O00602 326 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 MOSP00540 346 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 EIF4EBP1Q13541 118 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 TRAT1Q6PIZ9 186 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 S4R3C0 116 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 hADV38S2A0JD32 116 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 MBD3L4A6NDZ8 208 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 MBD3L3A6NE82 208 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 MBD3L5A6NJ08 208 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 NKX6-3A6NJ46 265 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 APOA2P02652 100 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 PYYP10082 97 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 CD24P25063 80 aa11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 VDAC2P45880 294 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 MBD3L2Q8NHZ7 208 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 GSX1Q9H4S2 264 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
PRPF40B-209ENST00000548825 A0A1B0GV90 55 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 A8MXE2 369 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 E7EUB6 86 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 CT45A6P0DMU7 189 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 CT45A5P0DMU8 189 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 CT45A7P0DMV0 189 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 RND2P52198 227 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 SSBP2P81877 361 aaPredicted RBP11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 PLGLAQ15195 96 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 SSX2Q16385 188 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 LEMD1Q68G75 181 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 A0A0G2JNJ9 132 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 DPRXA6NFQ7 191 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 PDE6DO43924 150 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 CNN1P51911 297 aaKnown RBP11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 LINC01560Q8TB33 94 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 Q9UFV3 132 aa11.18□□□□□ -0.62
PRPF40B-209ENST00000548825 NUPR1O60356 82 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 MT-CO2P00403 227 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 GNG4P50150 75 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 UBE2L3P68036 154 aaKnown RBP11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 TMEM183AQ8IXX5 376 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 TPSG1Q9NRR2 321 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 SNURFLB1AK76 121 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 RNF224P0DH78 156 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 RANP62826 216 aaKnown RBP11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 DMRT1Q9Y5R6 373 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 ELOA3CA0A087WX78 387 aaPredicted RBP11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 NTF3P20783 257 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 CENPWQ5EE01 88 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 MORN5Q5VZ52 161 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 FLYWCH2Q96CP2 140 aaKnown RBP11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 ANAPC16Q96DE5 110 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 ASCL2Q99929 193 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
PRPF40B-209ENST00000548825 IGKV1OR2-108A0A075B7D4 117 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 HELTA6NFD8 242 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 NDUFB3O43676 98 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 CRYABP02511 175 aaKnown RBP11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 HIST1H1BP16401 226 aaKnown RBP11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 TNFRSF1AP19438 455 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 SP5Q6BEB4 398 aaPredicted RBP11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 ZNF714Q96N38 554 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 PPIAL4EA0A075B759 164 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 PPIAL4DF5H284 164 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 LINC00869P0C866 280 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 PPIAL4FP0DN26 164 aa11.16□□□□□ -0.62
PRPF40B-209ENST00000548825 PMCHP20382 165 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms