RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 GPR6P46095 362 aaPredicted RBP4.37□□□□□ -1.71
USP28-213ENST00000544967 HINT1P49773 126 aaPredicted RBP4.37□□□□□ -1.71
USP28-213ENST00000544967 ZNF83P51522 516 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 CLRN1P58418 232 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 POU3F1Q03052 451 aaPredicted RBP4.37□□□□□ -1.71
USP28-213ENST00000544967 ARL16Q0P5N6 197 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 PSMG4Q5JS54 123 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 MOB1BQ7L9L4 216 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 GAPTQ8N292 157 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 SPTSSAQ969W0 71 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 PTPRQQ9UMZ3 2332 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 G3V3Y1 287 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.37□□□□□ -1.71
USP28-213ENST00000544967 MT-CO2P00403 227 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 OR5AL1P0C617 328 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 P0C879 139 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 PSG1P11464 419 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 LGALS7P47929 136 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 ZNF562Q6V9R5 426 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 GATSQ8NAP1 163 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 TSKUQ8WUA8 353 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 TMEM54Q969K7 222 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 APOBEC3DQ96AK3 386 aaPredicted RBP4.37□□□□□ -1.71
USP28-213ENST00000544967 OXGR1Q96P68 337 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 FAM173AQ9BQD7 235 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 PRDM14Q9GZV8 571 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 MEGF9Q9H1U4 602 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 DEPPQ9NTK1 212 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 PIGLQ9Y2B2 252 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 RAI1Q7Z5J4 1906 aaPredicted RBP4.37□□□□□ -1.71
USP28-213ENST00000544967 IGHV3-20A0A0C4DH32 117 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 GRIFINA4D1Z8 144 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 SNURFLB1AK76 121 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 H3BRM9 83 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 ISLRO14498 428 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 CXorf1O96002 111 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 HLA-DOBP13765 273 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 UBE2G1P62253 170 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 OR1C1Q15619 314 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 RTL8BQ17RB0 113 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 SAMD13Q5VXD3 122 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 SIGLEC15Q6ZMC9 328 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 LCNL1Q6ZST4 164 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 ZADH2Q8N4Q0 377 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 ZNF439Q8NDP4 499 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 RDH5Q92781 318 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 NPCDR1Q9BY65 106 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 V9GYV3 84 aa4.37□□□□□ -1.71
USP28-213ENST00000544967 NCOR2Q9Y618 2525 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 SMIM27A0A1W2PRY6 76 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 SERPINE2P07093 398 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 CRYGSP22914 178 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 CBLN1P23435 193 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 OPRM1P35372 400 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 OPRK1P41145 380 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 CYB561P49447 251 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 IGFBP7Q16270 282 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 ZNF718Q3SXZ3 478 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 SHISA6Q6ZSJ9 500 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 ATP5L2Q7Z4Y8 100 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 MMD2Q8IY49 270 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 TMEM178AQ8NBL3 297 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 TMEM190Q8WZ59 177 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 CHCHD1Q96BP2 118 aaKnown RBP4.36□□□□□ -1.71
USP28-213ENST00000544967 MBD6Q96DN6 1003 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 DEFB126Q9BYW3 111 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 SAP30LQ9HAJ7 183 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 TMEM38BQ9NVV0 291 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 OR2W1Q9Y3N9 320 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 RNF114Q9Y508 228 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 PCNX3Q9H6A9 2034 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 CFAP46Q8IYW2 2715 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 A0A1B0GUS0 222 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 FAM181BA6NEQ2 426 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 FNDC10F2Z333 226 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 K7EP34 96 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 CA7P43166 264 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 PSG4Q00888 419 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 PLCXD2Q0VAA5 305 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 SLC25A34Q6PIV7 304 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 FAM231DQ6ZW35 169 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 OR2M3Q8NG83 312 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 SNRNP40Q96DI7 357 aaKnown RBP4.36□□□□□ -1.71
USP28-213ENST00000544967 BORCS8Q96FH0 119 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 GRAMD2BQ96HH9 432 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 KCNIP1Q9NZI2 227 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 WDR83OSQ9Y284 106 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 HCFC1P51610 2035 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 UBE2L5PA0A1B0GUS4 154 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 PINLYPA6NC86 204 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 C2orf70A6NJV1 201 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 IGLL1P15814 213 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 GPM6AP51674 278 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 PSG9Q00887 426 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 TNXAQ16473 311 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 Q6ZPA2 131 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 TCF23Q7RTU1 214 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 OR10V1Q8NGI7 309 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 C18orf32Q8TCD1 76 aa4.36□□□□□ -1.71
USP28-213ENST00000544967 OR2V2Q96R30 315 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms