RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MLXQ9UH92 298 aa12.16□□□□□ -0.46
DDX55-212ENST00000544738 FAM25AB3EWG3 89 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 FAM25CB3EWG5 89 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 FAM25GB3EWG6 89 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 TGOLN2O43493 480 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 HPGDSO60760 199 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 TM4SF20Q53R12 229 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 RBPMS2Q6ZRY4 209 aaKnown RBP12.15□□□□□ -0.46
DDX55-212ENST00000544738 SLC38A6Q8IZM9 456 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 RPP25LQ8N5L8 163 aaKnown RBP12.15□□□□□ -0.46
DDX55-212ENST00000544738 OR52B4Q8NGK2 314 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 GATAD1Q8WUU5 269 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 AP3S1Q92572 193 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 ZNF436Q9C0F3 470 aaPredicted RBP12.15□□□□□ -0.46
DDX55-212ENST00000544738 HIPK2Q9H2X6 1198 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 NSG2Q9Y328 171 aa12.15□□□□□ -0.46
DDX55-212ENST00000544738 BTNL8Q6UX41 500 aa12.14□□□□□ -0.47
DDX55-212ENST00000544738 UNQ9165/PRO28630Q6UXU0 137 aa12.14□□□□□ -0.47
DDX55-212ENST00000544738 TBC1D26Q86UD7 250 aa12.14□□□□□ -0.47
DDX55-212ENST00000544738 TMEM14BQ9NUH8 114 aa12.14□□□□□ -0.47
DDX55-212ENST00000544738 C21orf62Q9NYP8 219 aa12.14□□□□□ -0.47
DDX55-212ENST00000544738 IGHV3-35A0A0C4DH35 117 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 OR2T8A6NH00 312 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 C15orf61A6NNL5 157 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 SCAF4O95104 1147 aaKnown RBP12.13□□□□□ -0.47
DDX55-212ENST00000544738 ZNF182P17025 639 aaPredicted RBP12.13□□□□□ -0.47
DDX55-212ENST00000544738 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 OR1P1Q8NH06 330 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 OR4A16Q8NH70 328 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 SCARB1Q8WTV0 552 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 C15orf40Q8WUR7 153 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 WFDC10AQ9H1F0 79 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 C5orf66Q9H5L9 145 aa12.13□□□□□ -0.47
DDX55-212ENST00000544738 DAZ1Q9NQZ3 744 aaKnown RBP12.13□□□□□ -0.47
DDX55-212ENST00000544738 NDUFA4O00483 81 aa12.12□□□□□ -0.47
DDX55-212ENST00000544738 MFAP2P55001 183 aa12.12□□□□□ -0.47
DDX55-212ENST00000544738 CTF1Q16619 201 aa12.12□□□□□ -0.47
DDX55-212ENST00000544738 RNASE10Q5GAN6 216 aaKnown RBP12.12□□□□□ -0.47
DDX55-212ENST00000544738 ZNF486Q96H40 463 aaPredicted RBP12.12□□□□□ -0.47
DDX55-212ENST00000544738 SELENOKQ9Y6D0 94 aa12.12□□□□□ -0.47
DDX55-212ENST00000544738 M0QYG6 137 aa12.11□□□□□ -0.47
DDX55-212ENST00000544738 GABARAPO95166 117 aa12.11□□□□□ -0.47
DDX55-212ENST00000544738 TBPP20226 339 aa12.11□□□□□ -0.47
DDX55-212ENST00000544738 ARRDC1Q8N5I2 433 aa12.11□□□□□ -0.47
DDX55-212ENST00000544738 SPAG8Q99932 426 aaPredicted RBP12.11□□□□□ -0.47
DDX55-212ENST00000544738 KLK11Q9UBX7 282 aa12.11□□□□□ -0.47
DDX55-212ENST00000544738 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 K7EIM0 57 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 K7EMT4 169 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 IGKV1-39P01597 117 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 IGKV1D-39P04432 117 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 PGAM2P15259 253 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 RND3P61587 244 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 Q56UQ5 140 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 LAMTOR1Q6IAA8 161 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 OR2C3Q8N628 320 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 UBAC2Q8NBM4 344 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 CHRDL1Q9BU40 450 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 NAA50Q9GZZ1 169 aaKnown RBP12.1□□□□□ -0.47
DDX55-212ENST00000544738 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 MTFP1Q9UDX5 166 aa12.1□□□□□ -0.47
DDX55-212ENST00000544738 IGHV3-21A0A0B4J1V1 117 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 CXorf65A6NEN9 183 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 TSPAN4O14817 238 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 ATG12O94817 140 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 CD3DP04234 171 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 HSPE1P61604 102 aaKnown RBP12.09□□□□□ -0.47
DDX55-212ENST00000544738 PRCDQ00LT1 54 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 RELQ04864 619 aaPredicted RBP12.09□□□□□ -0.47
DDX55-212ENST00000544738 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 GPR107Q5VW38 600 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 OR52I2Q8NH67 350 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 MRGPRFQ96AM1 343 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 TXN2Q99757 166 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 GGTLC1Q9BX51 225 aa12.09□□□□□ -0.47
DDX55-212ENST00000544738 LOC102724200A0A096LPH7 203 aaPredicted RBP12.08□□□□□ -0.48
DDX55-212ENST00000544738 C15orf62A8K5M9 175 aa12.08□□□□□ -0.48
DDX55-212ENST00000544738 F8W735 103 aaPredicted RBP12.08□□□□□ -0.48
DDX55-212ENST00000544738 NUPL2O15504 423 aaKnown RBP12.08□□□□□ -0.48
DDX55-212ENST00000544738 DEDDO75618 318 aa12.08□□□□□ -0.48
DDX55-212ENST00000544738 CTSGP08311 255 aa12.08□□□□□ -0.48
DDX55-212ENST00000544738 ADMP35318 185 aa12.08□□□□□ -0.48
DDX55-212ENST00000544738 MFAP4P55083 255 aa12.08□□□□□ -0.48
DDX55-212ENST00000544738 ERHP84090 104 aaKnown RBP12.08□□□□□ -0.48
DDX55-212ENST00000544738 ZNF114Q8NC26 417 aa12.08□□□□□ -0.48
DDX55-212ENST00000544738 ZFAND1Q8TCF1 268 aa12.08□□□□□ -0.48
DDX55-212ENST00000544738 MISP3Q96FF7 219 aa12.08□□□□□ -0.48
DDX55-212ENST00000544738 C20orf24Q9BUV8 137 aa12.08□□□□□ -0.48
DDX55-212ENST00000544738 I3L2K1 104 aa12.07□□□□□ -0.48
DDX55-212ENST00000544738 SMIM18P0DKX4 95 aa12.07□□□□□ -0.48
DDX55-212ENST00000544738 FCGR2BP31994 310 aaPredicted RBP12.07□□□□□ -0.48
DDX55-212ENST00000544738 PIGPP57054 158 aa12.07□□□□□ -0.48
DDX55-212ENST00000544738 RNASE12Q5GAN4 147 aaKnown RBP12.07□□□□□ -0.48
DDX55-212ENST00000544738 TERB2Q8NHR7 220 aa12.07□□□□□ -0.48
DDX55-212ENST00000544738 ABHD1Q96SE0 405 aa12.07□□□□□ -0.48
DDX55-212ENST00000544738 C3orf85A0A1B0GTC6 90 aa12.06□□□□□ -0.48
DDX55-212ENST00000544738 OR4C46A6NHA9 309 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms