RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CNOT1A5YKK6 2376 aaKnown RBP14.48□□□□□ -0.09
RAB40C-205ENST00000539661 TRAV3A0A0B4J244 114 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 CELA3BP08861 270 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 IGFBP2P18065 325 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 USF1P22415 310 aaPredicted RBP14.48□□□□□ -0.09
RAB40C-205ENST00000539661 HINT1P49773 126 aaPredicted RBP14.48□□□□□ -0.09
RAB40C-205ENST00000539661 TCL1AP56279 114 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 FAM19A2Q8N3H0 131 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 TMEM251Q8N6I4 163 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 IGF2BP2-AS1Q96M15 143 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 ENY2Q9NPA8 101 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 A0A1W2PRE2 83 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 NTF3P20783 257 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 SLC35B1P78383 322 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 KLF5Q13887 457 aaPredicted RBP14.48□□□□□ -0.09
RAB40C-205ENST00000539661 WDR82Q6UXN9 313 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 FAM90A1Q86YD7 464 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 UBALD2Q8IYN6 164 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 VKORC1L1Q8N0U8 176 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 TPRX1Q8N7U7 411 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 CT55Q8WUE5 264 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 NABP2Q9BQ15 211 aa14.48□□□□□ -0.09
RAB40C-205ENST00000539661 SMG1Q96Q15 3661 aaKnown RBP14.48□□□□□ -0.09
RAB40C-205ENST00000539661 TRAV34A0A0B4J273 112 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 TAS2R45P59539 299 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 HSPE1P61604 102 aaKnown RBP14.47□□□□□ -0.09
RAB40C-205ENST00000539661 TBR1Q16650 682 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 ABHD17BQ5VST6 288 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 OR4S2Q8NH73 311 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 GNG12Q9UBI6 72 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 PCSK5Q92824 1860 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 TET2Q6N021 2002 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-205ENST00000539661 IGHV2-70DA0A0C4DH43 119 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 UNQ5815/PRO19632Q6UWF5 114 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 OR8B3Q8NGG8 313 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 OR8B2Q96RD0 313 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 ABI3Q9P2A4 366 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 METRNQ9UJH8 293 aa14.47□□□□□ -0.09
RAB40C-205ENST00000539661 IGLC7A0M8Q6 106 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 H0YJW9 148 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 TNFSF4P23510 183 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 C6orf15Q6UXA7 325 aaPredicted RBP14.46□□□□□ -0.09
RAB40C-205ENST00000539661 CXorf67Q86X51 503 aaPredicted RBP14.46□□□□□ -0.09
RAB40C-205ENST00000539661 MUC15Q8N387 334 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 KLF14Q8TD94 323 aaPredicted RBP14.46□□□□□ -0.09
RAB40C-205ENST00000539661 ALKBH7Q9BT30 221 aaPredicted RBP14.46□□□□□ -0.09
RAB40C-205ENST00000539661 HES7Q9BYE0 225 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 PLEKHA3Q9HB20 300 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 TMEM14BQ9NUH8 114 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 DOCK10Q96BY6 2186 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 FAM181BA6NEQ2 426 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 ACTL6BO94805 426 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 DDB2Q92466 427 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 ZNF503Q96F45 646 aa14.46□□□□□ -0.09
RAB40C-205ENST00000539661 GGTLC3B5MD39 225 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 HSBP1O75506 76 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 MPV17P39210 176 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 SLAQ13239 276 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 CR1LQ2VPA4 569 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 FAM231DQ6ZW35 169 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 FAM214BQ7L5A3 538 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 OR4F17Q8NGA8 305 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 SAP30LQ9HAJ7 183 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 SERTAD4Q9NUC0 356 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 SPTBN2O15020 2390 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 MGST1P10620 155 aaKnown RBP14.45□□□□□ -0.1
RAB40C-205ENST00000539661 C3AR1Q16581 482 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 FBLN7Q53RD9 439 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 TMEM105Q8N8V8 129 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 DOCK7Q96N67 2140 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 LOC105371242A0A075B767 164 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 TFF1P04155 84 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 TNXAQ16473 311 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 LTC4SQ16873 150 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 RPL39P5Q59GN2 51 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 SPACA3Q8IXA5 215 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 ATOH7Q8N100 152 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 LYG1Q8N1E2 194 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 DCTN5Q9BTE1 182 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 FAM234AQ9H0X4 552 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 IFI27L2Q9H2X8 130 aa14.45□□□□□ -0.1
RAB40C-205ENST00000539661 OR7C2O60412 319 aa14.44□□□□□ -0.1
RAB40C-205ENST00000539661 RPS20P60866 119 aaKnown RBP14.44□□□□□ -0.1
RAB40C-205ENST00000539661 UBE2G1P62253 170 aa14.44□□□□□ -0.1
RAB40C-205ENST00000539661 OR2V2Q96R30 315 aa14.44□□□□□ -0.1
RAB40C-205ENST00000539661 CACNA1DQ01668 2161 aa14.44□□□□□ -0.1
RAB40C-205ENST00000539661 TRAV30A0A087WSZ9 112 aa14.44□□□□□ -0.1
RAB40C-205ENST00000539661 ATP5IP56385 69 aaPredicted RBP14.44□□□□□ -0.1
RAB40C-205ENST00000539661 MAJINQ3KP22 176 aa14.44□□□□□ -0.1
RAB40C-205ENST00000539661 LCN12Q6JVE5 192 aa14.44□□□□□ -0.1
RAB40C-205ENST00000539661 MBD6Q96DN6 1003 aa14.44□□□□□ -0.1
RAB40C-205ENST00000539661 M0R2Z0 102 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 F2RL2O00254 374 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 OR2J3O76001 311 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 FAM162BQ5T6X4 162 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 INO80CQ6PI98 192 aaPredicted RBP14.43□□□□□ -0.1
RAB40C-205ENST00000539661 CD177Q8N6Q3 437 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 CHRDL1Q9BU40 450 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 GCM1Q9NP62 436 aa14.43□□□□□ -0.1
RAB40C-205ENST00000539661 A0A1W2PN81 502 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms