RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 LPAR6P43657 344 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 TAS2R31P59538 309 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 PHLDA2Q53GA4 152 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 SPINK9Q5DT21 86 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 RNASE12Q5GAN4 147 aaKnown RBP6.38□□□□□ -1.39
PABPC1-202ENST00000517403 ZNF57Q68EA5 555 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-202ENST00000517403 FAM24BQ8N5W8 94 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 SAMD12Q8N8I0 201 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 OR4A5Q8NH83 315 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 VSTM2AQ8TAG5 236 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 SCARB1Q8WTV0 552 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 EEF1AKMT3Q96AZ1 226 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 ZNF2Q9BSG1 426 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-202ENST00000517403 QTRT1Q9BXR0 403 aaKnown RBP6.38□□□□□ -1.39
PABPC1-202ENST00000517403 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 PLEKHA2Q9HB19 425 aa6.38□□□□□ -1.39
PABPC1-202ENST00000517403 IGHV3OR16-13A0A075B7E8 117 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 IGHV3-74A0A0B4J1X5 117 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 PRSS29PA6NIE9 313 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 I3L2K1 104 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 M0QYG6 137 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 CREBL2O60519 120 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-202ENST00000517403 HPRT1P00492 218 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 HRASP01112 189 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 KRASP01116 189 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 IGKV1-5P01602 117 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 APOHP02749 345 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-202ENST00000517403 SERPINE2P07093 398 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 P0C879 139 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 NQO2P16083 231 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 PI3P19957 117 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 HLA-DMAP28067 261 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 ARL6IP1Q15041 203 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 DEFB135Q30KP9 77 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 DHRS11Q6UWP2 260 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 OR4D10Q8NGI6 311 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 IL17DQ8TAD2 202 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 GPX8Q8TED1 209 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 LINC00476Q8WZB0 136 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 SEC22AQ96IW7 307 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 GGTLC1Q9BX51 225 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 YTHDF1Q9BYJ9 559 aaKnown RBP6.37□□□□□ -1.39
PABPC1-202ENST00000517403 SEPSECSQ9HD40 501 aaKnown RBP6.37□□□□□ -1.39
PABPC1-202ENST00000517403 HEYLQ9NQ87 328 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-202ENST00000517403 TMEM14BQ9NUH8 114 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 TECRQ9NZ01 308 aaKnown RBP6.37□□□□□ -1.39
PABPC1-202ENST00000517403 COMMD9Q9P000 198 aa6.37□□□□□ -1.39
PABPC1-202ENST00000517403 F11RQ9Y624 299 aaKnown RBP6.37□□□□□ -1.39
PABPC1-202ENST00000517403 HERC2O95714 4834 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 A0A0A6YYH2 397 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 TRBV7-1A0A0A6YYK4 115 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 DPPA5A6NC42 116 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 A6NJ64 397 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 C15orf61A6NNL5 157 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 HPGDSO60760 199 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 SCGNO76038 276 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 SLC22A5O76082 557 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 CTSGP08311 255 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 ELK1P19419 428 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 F2RP25116 425 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 PTBP1P26599 531 aaKnown RBP eCLIP6.36□□□□□ -1.39
PABPC1-202ENST00000517403 VBP1P61758 197 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 TATDN3Q17R31 274 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 UBE2NLQ5JXB2 153 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 SLC25A42Q86VD7 318 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 APRG1Q8IVJ8 170 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 OR52B4Q8NGK2 314 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 DGCR14Q96DF8 476 aaKnown RBP6.36□□□□□ -1.39
PABPC1-202ENST00000517403 RNF2Q99496 336 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 FUNDC2Q9BWH2 189 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 HINT2Q9BX68 163 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 SLC2A8Q9NY64 477 aa6.36□□□□□ -1.39
PABPC1-202ENST00000517403 KMT2AQ03164 3969 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 CTSDP07339 412 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-202ENST00000517403 TRAPPC2P0DI81 140 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 TRAPPC2BP0DI82 140 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 DEFA4P12838 97 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 RPL35AP18077 110 aaKnown RBP6.35□□□□□ -1.39
PABPC1-202ENST00000517403 RAP2BP61225 183 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 TMEM69Q5SWH9 247 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 FAM90A2PQ658T7 463 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 PLET1Q6UQ28 207 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 GSG1LQ6UXU4 331 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 LYG2Q86SG7 212 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 TBC1D26Q86UD7 250 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 SNX29P2Q8IUI4 249 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 RPP25LQ8N5L8 163 aaKnown RBP6.35□□□□□ -1.39
PABPC1-202ENST00000517403 DMBX1Q8NFW5 382 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 SLC25A46Q96AG3 418 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 TP53RKQ96S44 253 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 COMMD5Q9GZQ3 224 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 MIXL1Q9H2W2 232 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 FNDC4Q9H6D8 234 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-202ENST00000517403 IFT46Q9NQC8 304 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 OR51B2Q9Y5P1 312 aa6.35□□□□□ -1.39
PABPC1-202ENST00000517403 AGRNO00468 2067 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 LOC102724200A0A096LPH7 203 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-202ENST00000517403 A0A1B0GU03 582 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 CHEK1O14757 476 aa6.34□□□□□ -1.39
PABPC1-202ENST00000517403 TSPAN4O14817 238 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms