RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 LINC00476Q8WZB0 136 aa9.05□□□□□ -0.96
SNHG4-208ENST00000514110 LSM10Q969L4 123 aaKnown RBP9.05□□□□□ -0.96
SNHG4-208ENST00000514110 C20orf24Q9BUV8 137 aa9.05□□□□□ -0.96
SNHG4-208ENST00000514110 TP53TG1Q9Y2A0 90 aa9.05□□□□□ -0.96
SNHG4-208ENST00000514110 CXorf65A6NEN9 183 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 K7EMT4 169 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 GPR31O00270 319 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 SNAPC5O75971 98 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 RPL35AP18077 110 aaKnown RBP9.04□□□□□ -0.96
SNHG4-208ENST00000514110 KCTD21Q4G0X4 260 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 Q56UQ5 140 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 CROCCP3Q8IVE0 287 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 CMTM1Q8IZ96 169 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 CADM3Q8N126 398 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 ATP6V0BQ99437 205 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 PRNDQ9UKY0 176 aa9.04□□□□□ -0.96
SNHG4-208ENST00000514110 UBE2CO00762 179 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
SNHG4-208ENST00000514110 CTSGP08311 255 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 HLA-DMAP28067 261 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 BMI1P35226 326 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 HRH1P35367 487 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 LSM3P62310 102 aaKnown RBP9.03□□□□□ -0.96
SNHG4-208ENST00000514110 PHLDA2Q53GA4 152 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 TSPAN14Q8NG11 270 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 OR6F1Q8NGZ6 308 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 RNF183Q96D59 192 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 TMEM56Q96MV1 263 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 TMEM14BQ9NUH8 114 aa9.03□□□□□ -0.96
SNHG4-208ENST00000514110 KIR2DL5BA0A0G2JN68 375 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 KIR2DL5BA0A0G2JPC4 375 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 NUPR2A6NF83 97 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 OR4C46A6NHA9 309 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 C15orf61A6NNL5 157 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 C15orf62A8K5M9 175 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 LY6G6CO95867 125 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 IGKV1-39P01597 117 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 IGKV1D-39P04432 117 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 EIF4EP06730 217 aaKnown RBP9.02□□□□□ -0.97
SNHG4-208ENST00000514110 PRSS3P35030 304 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 ZNF124Q15973 351 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 APRG1Q8IVJ8 170 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 KIR2DL5AQ8N109 375 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 STPG3Q8N7X2 389 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 OR1P1Q8NH06 330 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 OR5B3Q8NH48 314 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 KIR2DL5BQ8NHK3 375 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 GPX8Q8TED1 209 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 YIPF6Q96EC8 236 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 RNF2Q99496 336 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 FKBP11Q9NYL4 201 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 SMPXQ9UHP9 88 aa9.02□□□□□ -0.97
SNHG4-208ENST00000514110 IGHV3-49A0A0A0MS15 119 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 IGHV7-4-1A0A0J9YVY3 117 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 I3L2K1 104 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 CHEK1O14757 476 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 IGHV3-48P01763 117 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 FCGR2BP31994 310 aaPredicted RBP9.01□□□□□ -0.97
SNHG4-208ENST00000514110 CEMP1Q6PRD7 247 aaPredicted RBP9.01□□□□□ -0.97
SNHG4-208ENST00000514110 TBC1D26Q86UD7 250 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 SLC25A46Q96AG3 418 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 MISP3Q96FF7 219 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 GALNT14Q96FL9 552 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 SEC22AQ96IW7 307 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 TSC22D3Q99576 134 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 RHPN1-AS1Q9BWJ2 59 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 MAP6D1Q9H9H5 199 aa9.01□□□□□ -0.97
SNHG4-208ENST00000514110 NUPL2O15504 423 aaKnown RBP9□□□□□ -0.97
SNHG4-208ENST00000514110 MFAP4P55083 255 aa9□□□□□ -0.97
SNHG4-208ENST00000514110 TSPAN5P62079 268 aa9□□□□□ -0.97
SNHG4-208ENST00000514110 RELQ04864 619 aaPredicted RBP9□□□□□ -0.97
SNHG4-208ENST00000514110 OR4A16Q8NH70 328 aa9□□□□□ -0.97
SNHG4-208ENST00000514110 OR10C1Q96KK4 312 aa9□□□□□ -0.97
SNHG4-208ENST00000514110 FAM212BQ9NTI7 297 aaPredicted RBP9□□□□□ -0.97
SNHG4-208ENST00000514110 COMMD3Q9UBI1 195 aa9□□□□□ -0.97
SNHG4-208ENST00000514110 IGKV3-7A0A075B6H7 116 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 IGHV3OR16-13A0A075B7E8 117 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 IGHV3-74A0A0B4J1X5 117 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 YIF1AO95070 293 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 MT-CO2P00403 227 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 ATF4P18848 351 aaPredicted RBP8.99□□□□□ -0.97
SNHG4-208ENST00000514110 TFPI2P48307 235 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 PRCDQ00LT1 54 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 H2BFWTQ7Z2G1 175 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 ZNF114Q8NC26 417 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 MRGPRFQ96AM1 343 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 TXN2Q99757 166 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 NXF2Q9GZY0 626 aaKnown RBP8.99□□□□□ -0.97
SNHG4-208ENST00000514110 FRAS1Q86XX4 4008 aa8.99□□□□□ -0.97
SNHG4-208ENST00000514110 KMT2AQ03164 3969 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 APOA1P02647 267 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 S100GP29377 79 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 UCP3P55916 312 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 HSPE1P61604 102 aaKnown RBP8.98□□□□□ -0.97
SNHG4-208ENST00000514110 IZUMO4Q1ZYL8 232 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 SPINK9Q5DT21 86 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 FAM90A2PQ658T7 463 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 LPCAT3Q6P1A2 487 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 SNX29P2Q8IUI4 249 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 786.5 ms