RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 UPK2O00526 184 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 EI24O14681 340 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 NUDT3O95989 172 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 IGKV1-13P0DP09 117 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 CD37P11049 281 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 GNB3P16520 340 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 MAPK3P27361 379 aaPredicted RBP9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 RBM48Q5RL73 367 aaKnown RBP9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 ZNF773Q6PK81 442 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 CBR4Q8N4T8 237 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 HSD17B10Q99714 261 aaKnown RBP9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 NXF2Q9GZY0 626 aaKnown RBP9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 PGPEP1Q9NXJ5 209 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 TAS2R8Q9NYW2 309 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 RFNGQ9Y644 331 aa9.56□□□□□ -0.88
EXOSC3-207ENST00000490516 SMIM9A6NGZ8 99 aa9.55□□□□□ -0.88
EXOSC3-207ENST00000490516 GYG2O15488 501 aa9.55□□□□□ -0.88
EXOSC3-207ENST00000490516 FCGR1AP12314 374 aa9.55□□□□□ -0.88
EXOSC3-207ENST00000490516 MYL12AP19105 171 aa9.55□□□□□ -0.88
EXOSC3-207ENST00000490516 CCL18P55774 89 aa9.55□□□□□ -0.88
EXOSC3-207ENST00000490516 TOMM20LQ6UXN7 152 aa9.55□□□□□ -0.88
EXOSC3-207ENST00000490516 GSG1LQ6UXU4 331 aa9.55□□□□□ -0.88
EXOSC3-207ENST00000490516 GINS3Q9BRX5 216 aa9.55□□□□□ -0.88
EXOSC3-207ENST00000490516 Q9H8V8 135 aa9.55□□□□□ -0.88
EXOSC3-207ENST00000490516 IGHV3-48P01763 117 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 HLA-DQB1P01920 261 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 TRAPPC2P0DI81 140 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 TRAPPC2BP0DI82 140 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 NFYAP23511 347 aaPredicted RBP9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 FGF9P31371 208 aaPredicted RBP9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 DAD1P61803 113 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 NUTF2P61970 127 aaKnown RBP9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 ICAM4Q14773 271 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 SSX1Q16384 188 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 OR56B1Q8NGI3 324 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 DCANP1Q8TF63 244 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 DIMT1Q9UNQ2 313 aaKnown RBP9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 OR2W1Q9Y3N9 320 aa9.54□□□□□ -0.88
EXOSC3-207ENST00000490516 TEX50A0A1B0GTY4 177 aa9.53□□□□□ -0.88
EXOSC3-207ENST00000490516 WBP4O75554 376 aaKnown RBP9.53□□□□□ -0.88
EXOSC3-207ENST00000490516 DNAL1Q4LDG9 190 aa9.53□□□□□ -0.88
EXOSC3-207ENST00000490516 PSMG4Q5JS54 123 aa9.53□□□□□ -0.88
EXOSC3-207ENST00000490516 SLC25A46Q96AG3 418 aa9.53□□□□□ -0.88
EXOSC3-207ENST00000490516 HINT2Q9BX68 163 aa9.53□□□□□ -0.88
EXOSC3-207ENST00000490516 YTHDF2Q9Y5A9 579 aaKnown RBP9.53□□□□□ -0.88
EXOSC3-207ENST00000490516 A0A075B6Q4 140 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 TNFSF12O43508 249 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 SLC22A5O76082 557 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 MFAP4P55083 255 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 FXYD7P58549 80 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 RCN1Q15293 331 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 ACSM3Q53FZ2 586 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 TTC32Q5I0X7 151 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 SSX7Q7RTT5 188 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 HSD17B13Q7Z5P4 300 aaPredicted RBP9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 PHYHIPQ92561 330 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 GFI1Q99684 422 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 Q9H3A6 140 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 ZFAND3Q9H8U3 227 aa9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 PUS1Q9Y606 427 aaKnown RBP eCLIP9.52□□□□□ -0.89
EXOSC3-207ENST00000490516 H3BMM0 161 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 CLDN12P56749 244 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 THOC7Q6I9Y2 204 aaKnown RBP9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 CDPF1Q6NVV7 123 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 SPAG16Q8N0X2 631 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 RAB3CQ96E17 227 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 MISP3Q96FF7 219 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 AIFM2Q9BRQ8 373 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 TMEM231Q9H6L2 316 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 PLGRKTQ9HBL7 147 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
EXOSC3-207ENST00000490516 RNF213Q63HN8 5207 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 LOC102723971A0A1B0GUV8 181 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 HELTA6NFD8 242 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 I3L2K1 104 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 SLC17A2O00624 439 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 DENRO43583 198 aaKnown RBP9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 GNG7O60262 68 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 CD1AP06126 327 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 GNGT1P63211 74 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 DHRS2Q13268 280 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 USF2Q15853 346 aaPredicted RBP9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 OR1L8Q8NGR8 309 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 LSM10Q969L4 123 aaKnown RBP9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 SLC7A6OSQ96CW6 309 aaPredicted RBP9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 TMEM80Q96HE8 168 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 TXN2Q99757 166 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 DCSTAMPQ9H295 470 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 MED4Q9NPJ6 270 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 NDUFA4L2Q9NRX3 87 aa9.5□□□□□ -0.89
EXOSC3-207ENST00000490516 A0A1B0GU03 582 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 LOC100130705A0A1B0GUX0 176 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 MFNGO00587 321 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 IFNA5P01569 189 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 NQO2P16083 231 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 GNRHRP30968 328 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 P2RY1P47900 373 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 TAS2R31P59538 309 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 CLINT1Q14677 625 aa9.49□□□□□ -0.89
EXOSC3-207ENST00000490516 POU2AF1Q16633 256 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms