RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ZNF773Q6PK81 442 aa10.74□□□□□ -0.69
SMG5-204ENST00000476954 ZNF705AQ6ZN79 300 aaPredicted RBP10.74□□□□□ -0.69
SMG5-204ENST00000476954 CBR4Q8N4T8 237 aa10.74□□□□□ -0.69
SMG5-204ENST00000476954 OR56B1Q8NGI3 324 aa10.74□□□□□ -0.69
SMG5-204ENST00000476954 PHYHIPQ92561 330 aa10.74□□□□□ -0.69
SMG5-204ENST00000476954 C17orf77Q96MU5 243 aa10.74□□□□□ -0.69
SMG5-204ENST00000476954 RAB40CQ96S21 281 aa10.74□□□□□ -0.69
SMG5-204ENST00000476954 LINC00588Q9Y4M8 146 aa10.74□□□□□ -0.69
SMG5-204ENST00000476954 TEX50A0A1B0GTY4 177 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 ZNF705FA8MVS1 300 aaPredicted RBP10.73□□□□□ -0.69
SMG5-204ENST00000476954 TNFSF12O43508 249 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 CD5P06127 495 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 ZNF705DP0CH99 300 aaPredicted RBP10.73□□□□□ -0.69
SMG5-204ENST00000476954 ZNF705BP0CI00 300 aaPredicted RBP10.73□□□□□ -0.69
SMG5-204ENST00000476954 TRAPPC2P0DI81 140 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 TRAPPC2BP0DI82 140 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 GNB3P16520 340 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 BTF3P20290 206 aaKnown RBP10.73□□□□□ -0.69
SMG5-204ENST00000476954 HAMPP81172 84 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 C15orf53Q8NAA6 179 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 GRAMD2BQ96HH9 432 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 NEU1Q99519 415 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 HINT2Q9BX68 163 aa10.73□□□□□ -0.69
SMG5-204ENST00000476954 LOC100130705A0A1B0GUX0 176 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 TMEM189A5PLL7 270 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 KRTAP10-1P60331 282 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 SPAG16Q8N0X2 631 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 SLC25A46Q96AG3 418 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 RAB3CQ96E17 227 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 TMEM80Q96HE8 168 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 GINS3Q9BRX5 216 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 PLGRKTQ9HBL7 147 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 TMEM140Q9NV12 185 aa10.72□□□□□ -0.69
SMG5-204ENST00000476954 ELF5Q9UKW6 265 aaPredicted RBP10.72□□□□□ -0.69
SMG5-204ENST00000476954 MFNGO00587 321 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 SLC17A2O00624 439 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 CD1AP06126 327 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 FXYD7P58549 80 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 OXA1LQ15070 435 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 PSMG4Q5JS54 123 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 DCANP1Q8TF63 244 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 C1QTNF4Q9BXJ3 329 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 ZFAND3Q9H8U3 227 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 RFNGQ9Y644 331 aa10.71□□□□□ -0.69
SMG5-204ENST00000476954 RPS10-NUDT3A0A1W2PQS6 291 aa10.7□□□□□ -0.7
SMG5-204ENST00000476954 I3L2K1 104 aa10.7□□□□□ -0.7
SMG5-204ENST00000476954 DENRO43583 198 aaKnown RBP10.7□□□□□ -0.7
SMG5-204ENST00000476954 NUDT3O95989 172 aa10.7□□□□□ -0.7
SMG5-204ENST00000476954 MFAP4P55083 255 aa10.7□□□□□ -0.7
SMG5-204ENST00000476954 C2orf76Q3KRA6 126 aa10.7□□□□□ -0.7
SMG5-204ENST00000476954 SERTAD4-AS1Q5TG53 156 aa10.7□□□□□ -0.7
SMG5-204ENST00000476954 Q6ZSN1 163 aa10.7□□□□□ -0.7
SMG5-204ENST00000476954 CCDC197Q8NCU1 140 aa10.7□□□□□ -0.7
SMG5-204ENST00000476954 AK6Q9Y3D8 172 aaKnown RBP10.7□□□□□ -0.7
SMG5-204ENST00000476954 YTHDF2Q9Y5A9 579 aaKnown RBP10.7□□□□□ -0.7
SMG5-204ENST00000476954 TMEM272A0A1B0GTI8 110 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 A0A1B0GU03 582 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 FGF9P31371 208 aaPredicted RBP10.69□□□□□ -0.7
SMG5-204ENST00000476954 DAD1P61803 113 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 RAB11BQ15907 218 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 SSX1Q16384 188 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 POU2AF1Q16633 256 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 HSD17B12Q53GQ0 312 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 C1orf146Q5VVC0 180 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 Q6ZS49 121 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 PYDC1Q8WXC3 89 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 FAM3DQ96BQ1 224 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 MISP3Q96FF7 219 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 DCSTAMPQ9H295 470 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 NDUFA4L2Q9NRX3 87 aa10.69□□□□□ -0.7
SMG5-204ENST00000476954 PUS1Q9Y606 427 aaKnown RBP eCLIP10.69□□□□□ -0.7
SMG5-204ENST00000476954 TEX48A0A1B0GUV7 120 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 IRGMA1A4Y4 181 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 SMIM9A6NGZ8 99 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 FAM229AH3BQW9 127 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 SULT1C2O00338 296 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 SLC22A5O76082 557 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 TAS2R31P59538 309 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 RCN1Q15293 331 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 THOC7Q6I9Y2 204 aaKnown RBP10.68□□□□□ -0.7
SMG5-204ENST00000476954 GSG1LQ6UXU4 331 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 SYT8Q8NBV8 401 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 OR1L8Q8NGR8 309 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 LSM10Q969L4 123 aaKnown RBP10.68□□□□□ -0.7
SMG5-204ENST00000476954 Q9H8V8 135 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 CCL28Q9NRJ3 127 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 NSG2Q9Y328 171 aa10.68□□□□□ -0.7
SMG5-204ENST00000476954 EFCAB10A6NFE3 127 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 KRTAP29-1A8MX34 341 aaPredicted RBP10.67□□□□□ -0.7
SMG5-204ENST00000476954 H3BMM0 161 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 GNG7O60262 68 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 MT-CO2P00403 227 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 NQO2P16083 231 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 HIST1H1DP16402 221 aaKnown RBP10.67□□□□□ -0.7
SMG5-204ENST00000476954 TALDO1P37837 337 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 P2RY1P47900 373 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 CCL18P55774 89 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 DEFB1P60022 68 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 ST3GAL4Q11206 333 aa10.67□□□□□ -0.7
SMG5-204ENST00000476954 SSX7Q7RTT5 188 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms