RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ZNF506Q5JVG8 444 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 PRR31Q5SQ13 230 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 TRMT10BQ6PF06 316 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 TEX43Q6ZNM6 134 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 OR4B1Q8NGF8 309 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 OR5D14Q8NGL3 314 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST1H2BHQ93079 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 OR2A7Q96R45 310 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 SDF2Q99470 211 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 SPIN2AQ99865 258 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST1H2BNQ99877 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 HIST1H2BMQ99879 126 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 SPIN2BQ9BPZ2 258 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 SEC61A2Q9H9S3 476 aa4.91□□□□□ -1.62
SMARCE1-208ENST00000474246 TGP01266 2768 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 J3QQQ9 107 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 RER1O15258 196 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 NPIPB7O75200 414 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 NUDT14O95848 222 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 IGKV1D-16P01601 117 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 SLC35G6P0C7Q6 338 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 ADCYAP1P18509 176 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 HNRNPA3P51991 378 aaKnown RBP4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 ARFRP1Q13795 201 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 C1DQ13901 141 aaKnown RBP4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF141Q15928 474 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 TDRG1Q3Y452 100 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 MS4A13Q5J8X5 152 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 LCN15Q6UWW0 184 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 PIANPQ8IYJ0 282 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 FBXL14Q8N1E6 418 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 LINC00471Q8N535 108 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 GVQW1Q8N7I0 195 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 ZDHHC22Q8N966 263 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 OR8S1Q8NH09 359 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 LINC01587Q99440 93 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 SSBP3Q9BWW4 388 aaPredicted RBP4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 FUT9Q9Y231 359 aa4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 NOP16Q9Y3C1 178 aaKnown RBP4.9□□□□□ -1.62
SMARCE1-208ENST00000474246 MCM3APO60318 1980 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 A0A087WWV3 80 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 TCRBV3S1A0A5B6 114 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 SULT2B1O00204 365 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 LMX1BO60663 402 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 RAMP1O60894 148 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 LINC00032P0C843 101 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 IFITM1P13164 125 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 COX6B1P14854 86 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 ZNF93P35789 620 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 PPP1CCP36873 323 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 LIM2P55344 173 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 HBG1P69891 147 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 HBG2P69892 147 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 OR7A5Q15622 319 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 ZNF626Q68DY1 528 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 MRPL54Q6P161 138 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 ZNF793Q6ZN11 406 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 ABCA7Q8IZY2 2146 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 ZCCHC24Q8N2G6 241 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 KCNRGQ8N5I3 272 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 C2orf48Q96LS8 159 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 CARD19Q96LW7 228 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 PCDH15Q96QU1 1955 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 GPHA2Q96T91 129 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 TM2D2Q9BX73 214 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 TVP23BQ9NYZ1 205 aa4.9□□□□□ -1.63
SMARCE1-208ENST00000474246 TRAV8-4A0A0B4J246 113 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 C5orf49A4QMS7 147 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 TNFSF12O43508 249 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 NEURL1O76050 574 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 CRYBB3P26998 211 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 GDF5P43026 501 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 HGFACQ04756 655 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 BEAN1Q3B7T3 259 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 Q6AWC8 147 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 CGB2Q6NT52 195 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 TMEM14EPQ6UXP3 125 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 SLC25A26Q70HW3 274 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 ANKRD29Q8N6D5 301 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 ZFP62Q8NB50 900 aaPredicted RBP4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 OR2T33Q8NG76 320 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 NPVFQ9HCQ7 196 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 TPRKBQ9Y3C4 175 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 THADAQ6YHU6 1953 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 MYH6P13533 1939 aa4.89□□□□□ -1.63
SMARCE1-208ENST00000474246 hCG_1818297A0A087WSY0 165 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 A0A087X0T9 212 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 SAA2-SAA4A0A096LPE2 208 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 IGLC7A0M8Q6 106 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 A8MT66 165 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 FGF3P11487 239 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 SAA4P35542 130 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 PTGDSP41222 190 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 GP2P55259 537 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 GABARAPL2P60520 117 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 HES1Q14469 280 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 ECSCRQ19T08 205 aa4.88□□□□□ -1.63
SMARCE1-208ENST00000474246 TTC32Q5I0X7 151 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms