RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 IGHV4-28A0A0C4DH34 117 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 IGHV7-4-1A0A0J9YVY3 117 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 C15orf61A6NNL5 157 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 M0R2N4 97 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 CHEK1O14757 476 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 RBFOX2O43251 390 aaKnown RBP eCLIP3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 MRPS14O60783 128 aaKnown RBP3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 ARL6IP5O75915 188 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 CDK2AP2O75956 126 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 FGF2P09038 288 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 GIG44P09565 113 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 CTXN2P0C2S0 81 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 TALDO1P37837 337 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 TFPI2P48307 235 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 RPS25P62851 125 aaKnown RBP3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 RPL11P62913 178 aaKnown RBP3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 WT1-ASQ06250 92 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 POU2AF1Q16633 256 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 LGALS9BQ3B8N2 356 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 SOHLH1Q5JUK2 328 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 HES5Q5TA89 166 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 FAM90A2PQ658T7 463 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 PVRIGQ6DKI7 326 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 ZNF66Q6ZN08 573 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 NR2C2APQ86WQ0 139 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 C10orf67Q8IYJ2 551 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 C8orf59Q8N0T1 100 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 DHRSXQ8N5I4 330 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 ARL6IP6Q8N6S5 226 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 UFD1Q92890 307 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 OR10C1Q96KK4 312 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 RHPN1-AS1Q9BWJ2 59 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 WDR12Q9GZL7 423 aaKnown RBP3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 HRASLSQ9HDD0 168 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 C21orf62Q9NYP8 219 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 V9GY05 133 aa3.71□□□□□ -1.82
SNRNP40-204ENST00000474025 IGHV3-49A0A0A0MS15 119 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 ERICH4A6NGS2 130 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 IFITM5A6NNB3 132 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 ZNF705EA8MWA4 302 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 K7EIM0 57 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 SULT1C2O00338 296 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 UPK2O00526 184 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 CYB5BO43169 146 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 TNFSF12O43508 249 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 SERPINE2P07093 398 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 CTSGP08311 255 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 P0DMU3 169 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 FAM231AP0DMU4 169 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 FAM231CP0DMU5 169 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 OR13C7P0DN81 318 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 MIFP14174 115 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 PSMA1P25786 263 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 RANBP1P43487 201 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 CMC4P56277 68 aaPredicted RBP3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 OR10A3P58181 314 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 TAS2R31P59538 309 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 FABP5Q01469 135 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 TRAM1Q15629 374 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 MSMO1Q15800 293 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 TOR2AQ5JU69 321 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 HACD4Q5VWC8 232 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 LEMD1Q68G75 181 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 THOC7Q6I9Y2 204 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 SLC25A24Q6NUK1 477 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 CNIH2Q6PI25 160 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 ZNF773Q6PK81 442 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 Q6ZR54 194 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 SPAG16Q8N0X2 631 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 CENPSQ8N2Z9 138 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 GBGT1Q8N5D6 347 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 FAM24BQ8N5W8 94 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 PACRGLQ8N7B6 248 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 UBAC2Q8NBM4 344 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 TMEM116Q8NCL8 245 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 SCARB1Q8WTV0 552 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 NUDCD2Q8WVJ2 157 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 C16orf92Q96LL3 132 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 AIFM2Q9BRQ8 373 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 SCRT1Q9BWW7 348 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 COMMD5Q9GZQ3 224 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 DCSTAMPQ9H295 470 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 C8orf4Q9NR00 106 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 AP5S1Q9NUS5 200 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 TMEM140Q9NV12 185 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 CELA1Q9UNI1 258 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 F11RQ9Y624 299 aaKnown RBP3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 X6R8D5 127 aa3.7□□□□□ -1.82
SNRNP40-204ENST00000474025 AGRNO00468 2067 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 IGHV3OR16-13A0A075B7E8 117 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 DEFB131BA0A096LNP1 70 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 IGHV3-74A0A0B4J1X5 117 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 TEX50A0A1B0GTY4 177 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 METTL21EPA6NDL7 271 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 TMEM235A6NFC5 223 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 PTGES3LE9PB15 166 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 H3BS24 57 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 NUPL2O15504 423 aaKnown RBP3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 SSX5O60225 188 aa3.69□□□□□ -1.82
SNRNP40-204ENST00000474025 DFFBO76075 338 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms