RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CD7P09564 240 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 TBPP20226 339 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 PIGPP57054 158 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 FAM106AQ4KMX7 169 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 TM4SF20Q53R12 229 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 FAAP20Q6NZ36 180 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 GTSCR1Q86UQ5 136 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 VN1R17PQ8TDU5 208 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 WDR89Q96FK6 387 aaPredicted RBP16.41■□□□□ 0.22
LIME1-203ENST00000465591 TP53RKQ96S44 253 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 TSC22D3Q99576 134 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 THYN1Q9P016 225 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 MLXQ9UH92 298 aa16.41■□□□□ 0.22
LIME1-203ENST00000465591 F8W735 103 aaPredicted RBP16.4■□□□□ 0.22
LIME1-203ENST00000465591 K7EIM0 57 aa16.4■□□□□ 0.22
LIME1-203ENST00000465591 CTDSPLO15194 276 aa16.4■□□□□ 0.22
LIME1-203ENST00000465591 H2BFWTQ7Z2G1 175 aa16.4■□□□□ 0.22
LIME1-203ENST00000465591 ZNF486Q96H40 463 aaPredicted RBP16.4■□□□□ 0.22
LIME1-203ENST00000465591 WFDC10AQ9H1F0 79 aa16.4■□□□□ 0.22
LIME1-203ENST00000465591 PLEKHA3Q9HB20 300 aa16.4■□□□□ 0.22
LIME1-203ENST00000465591 FKBP11Q9NYL4 201 aa16.4■□□□□ 0.22
LIME1-203ENST00000465591 OR2T8A6NH00 312 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 TGOLN2O43493 480 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 RAB3DO95716 219 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 IGKV1-5P01602 117 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 TAS2R19P59542 299 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 CD81P60033 236 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 SSBP1Q04837 148 aaKnown RBP16.39■□□□□ 0.21
LIME1-203ENST00000465591 STEAP1BQ6NZ63 245 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 PLET1Q6UQ28 207 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 TMEM61Q8N0U2 210 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 UXS1Q8NBZ7 420 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 OR13C8Q8NGS7 320 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 TERB2Q8NHR7 220 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 SCARB1Q8WTV0 552 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 NEURL2Q9BR09 285 aa16.39■□□□□ 0.21
LIME1-203ENST00000465591 TECRQ9NZ01 308 aaKnown RBP16.39■□□□□ 0.21
LIME1-203ENST00000465591 P0C879 139 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 GUCA2BQ16661 112 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 HAGHQ16775 308 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 SCGB2B2Q4G0G5 96 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 SPANXN2Q5MJ10 180 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 OR4A16Q8NH70 328 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 MARCH1Q8TCQ1 289 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 SMIM4Q8WVI0 70 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 ZNF414Q96IQ9 312 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 TMEM56Q96MV1 263 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 SOSTQ9BQB4 213 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 CHRDL1Q9BU40 450 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 ZNF436Q9C0F3 470 aaPredicted RBP16.38■□□□□ 0.21
LIME1-203ENST00000465591 ZMAT4Q9H898 229 aa16.38■□□□□ 0.21
LIME1-203ENST00000465591 CYB5BO43169 146 aa16.37■□□□□ 0.21
LIME1-203ENST00000465591 PRCDQ00LT1 54 aa16.37■□□□□ 0.21
LIME1-203ENST00000465591 SP6Q3SY56 376 aa16.37■□□□□ 0.21
LIME1-203ENST00000465591 SPINK9Q5DT21 86 aa16.37■□□□□ 0.21
LIME1-203ENST00000465591 BTNL8Q6UX41 500 aa16.37■□□□□ 0.21
LIME1-203ENST00000465591 OR2C3Q8N628 320 aa16.37■□□□□ 0.21
LIME1-203ENST00000465591 C21orf62Q9NYP8 219 aa16.37■□□□□ 0.21
LIME1-203ENST00000465591 C3orf85A0A1B0GTC6 90 aa16.36■□□□□ 0.21
LIME1-203ENST00000465591 C8orf88P0DMB2 117 aa16.36■□□□□ 0.21
LIME1-203ENST00000465591 ADMP35318 185 aa16.36■□□□□ 0.21
LIME1-203ENST00000465591 ZNF57Q68EA5 555 aaPredicted RBP16.36■□□□□ 0.21
LIME1-203ENST00000465591 LINC00322Q6ZN03 302 aaPredicted RBP16.36■□□□□ 0.21
LIME1-203ENST00000465591 CCDC190Q86UF4 302 aa16.36■□□□□ 0.21
LIME1-203ENST00000465591 DEFB125Q8N687 156 aa16.36■□□□□ 0.21
LIME1-203ENST00000465591 OR1P1Q8NH06 330 aa16.36■□□□□ 0.21
LIME1-203ENST00000465591 TMEM190Q8WZ59 177 aa16.36■□□□□ 0.21
LIME1-203ENST00000465591 TUBA4BQ9H853 241 aa16.36■□□□□ 0.21
LIME1-203ENST00000465591 RYR3Q15413 4870 aa16.35■□□□□ 0.21
LIME1-203ENST00000465591 A0A0B4J293 547 aa16.35■□□□□ 0.21
LIME1-203ENST00000465591 A0A0G2JRQ6 117 aa16.35■□□□□ 0.21
LIME1-203ENST00000465591 GSTZ1O43708 216 aaPredicted RBP16.35■□□□□ 0.21
LIME1-203ENST00000465591 HSPE1P61604 102 aaKnown RBP16.35■□□□□ 0.21
LIME1-203ENST00000465591 CNPY1Q3B7I2 92 aa16.35■□□□□ 0.21
LIME1-203ENST00000465591 PYDC2Q56P42 97 aa16.35■□□□□ 0.21
LIME1-203ENST00000465591 BSCL2Q96G97 398 aaPredicted RBP16.35■□□□□ 0.21
LIME1-203ENST00000465591 SLC2A8Q9NY64 477 aa16.35■□□□□ 0.21
LIME1-203ENST00000465591 COPZ2Q9P299 210 aa16.35■□□□□ 0.21
LIME1-203ENST00000465591 I3L2K1 104 aa16.34■□□□□ 0.21
LIME1-203ENST00000465591 SCAF4O95104 1147 aaKnown RBP16.34■□□□□ 0.21
LIME1-203ENST00000465591 CTSDP07339 412 aaPredicted RBP16.34■□□□□ 0.21
LIME1-203ENST00000465591 ETV6P41212 452 aa16.34■□□□□ 0.21
LIME1-203ENST00000465591 UBAC2Q8NBM4 344 aa16.34■□□□□ 0.21
LIME1-203ENST00000465591 OR4C16Q8NGL9 310 aa16.34■□□□□ 0.21
LIME1-203ENST00000465591 ZFAND1Q8TCF1 268 aa16.34■□□□□ 0.21
LIME1-203ENST00000465591 RTBDNQ9BSG5 229 aaPredicted RBP16.34■□□□□ 0.21
LIME1-203ENST00000465591 IGHV3OR16-8A0A075B7F1 116 aa16.33■□□□□ 0.2
LIME1-203ENST00000465591 RBMY1BA6NDE4 496 aaKnown RBP16.33■□□□□ 0.2
LIME1-203ENST00000465591 RBMY1EA6NEQ0 496 aaKnown RBP16.33■□□□□ 0.2
LIME1-203ENST00000465591 IGHV3-48P01763 117 aa16.33■□□□□ 0.2
LIME1-203ENST00000465591 RBMY1DP0C7P1 496 aaKnown RBP16.33■□□□□ 0.2
LIME1-203ENST00000465591 UCP1P25874 307 aa16.33■□□□□ 0.2
LIME1-203ENST00000465591 ELLP55199 621 aaPredicted RBP16.33■□□□□ 0.2
LIME1-203ENST00000465591 CCDC71LQ8N9Z2 235 aa16.33■□□□□ 0.2
LIME1-203ENST00000465591 ZNF114Q8NC26 417 aa16.33■□□□□ 0.2
LIME1-203ENST00000465591 OR1L6Q8NGR2 347 aa16.33■□□□□ 0.2
LIME1-203ENST00000465591 MISP3Q96FF7 219 aa16.33■□□□□ 0.2
LIME1-203ENST00000465591 PALMDQ9NP74 551 aa16.33■□□□□ 0.2
LIME1-203ENST00000465591 UFC1Q9Y3C8 167 aa16.33■□□□□ 0.2
LIME1-203ENST00000465591 V9GYH0 126 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms