RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 H2AFB2P0C5Z0 115 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 OR8U8P0C7N1 319 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 CD33P20138 364 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 SPCS3P61009 180 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 WT1-ASQ06250 92 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 ZNF616Q08AN1 781 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 SMCO1Q147U7 214 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 ANKRD55Q3KP44 614 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 NMSQ5H8A3 153 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 OR52E5Q8NH55 327 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 RAX2Q96IS3 184 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 FBXL7Q9UJT9 491 aa15.36■□□□□ 0.05
COL9A3-204ENST00000463487 OR2J3O76001 311 aa15.35■□□□□ 0.05
COL9A3-204ENST00000463487 IFNA21P01568 189 aa15.35■□□□□ 0.05
COL9A3-204ENST00000463487 SNCAP37840 140 aa15.35■□□□□ 0.05
COL9A3-204ENST00000463487 DEFB136Q30KP8 78 aa15.35■□□□□ 0.05
COL9A3-204ENST00000463487 C15orf32Q32M92 178 aa15.35■□□□□ 0.05
COL9A3-204ENST00000463487 AARDQ4LEZ3 155 aa15.35■□□□□ 0.05
COL9A3-204ENST00000463487 OR11H1Q8NG94 326 aa15.35■□□□□ 0.05
COL9A3-204ENST00000463487 OR1N2Q8NGR9 330 aa15.35■□□□□ 0.05
COL9A3-204ENST00000463487 CXorf58Q96LI9 332 aa15.35■□□□□ 0.05
COL9A3-204ENST00000463487 F11RQ9Y624 299 aaKnown RBP15.35■□□□□ 0.05
COL9A3-204ENST00000463487 HSPB1P04792 205 aaKnown RBP15.34■□□□□ 0.05
COL9A3-204ENST00000463487 SLC25A6P12236 298 aa15.34■□□□□ 0.05
COL9A3-204ENST00000463487 SUB1P53999 127 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL9A3-204ENST00000463487 EXOSC2Q13868 293 aaKnown RBP15.34■□□□□ 0.05
COL9A3-204ENST00000463487 SLC25A24Q6NUK1 477 aa15.34■□□□□ 0.05
COL9A3-204ENST00000463487 OR1S1Q8NH92 325 aa15.34■□□□□ 0.05
COL9A3-204ENST00000463487 EEF1AKMT3Q96AZ1 226 aa15.34■□□□□ 0.05
COL9A3-204ENST00000463487 P2RX4Q99571 388 aa15.34■□□□□ 0.05
COL9A3-204ENST00000463487 RANGRFQ9HD47 186 aaPredicted RBP15.34■□□□□ 0.05
COL9A3-204ENST00000463487 IGLV11-55A0A075B6I3 123 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 INS-IGF2F8WCM5 200 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 LINC01619G3V211 115 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 IFITM3Q01628 133 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 KLK9Q2XQG4 91 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 ZNF343Q6P1L6 599 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 PLET1Q6UQ28 207 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 ETV3LQ6ZN32 361 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 Q6ZRM9 215 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 OR2C3Q8N628 320 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 ZNF114Q8NC26 417 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 OR1P1Q8NH06 330 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 KLK9Q9UKQ9 250 aa15.33■□□□□ 0.04
COL9A3-204ENST00000463487 WNK1Q9H4A3 2382 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 CEBPZOSA8MTT3 80 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 HOXB5P09067 269 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 ZP3P21754 424 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 FHL3Q13643 280 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 PDLIM3Q53GG5 364 aaPredicted RBP15.32■□□□□ 0.04
COL9A3-204ENST00000463487 LINC00482Q8N8I6 264 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 FANCD2OSQ96PS1 177 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 DUX3Q96PT4 197 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 MCRIP2Q9BUT9 160 aaKnown RBP15.32■□□□□ 0.04
COL9A3-204ENST00000463487 GPR61Q9BZJ8 451 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 HIPK2Q9H2X6 1198 aa15.32■□□□□ 0.04
COL9A3-204ENST00000463487 PEF1Q9UBV8 284 aaKnown RBP15.32■□□□□ 0.04
COL9A3-204ENST00000463487 TRBV7-1A0A0A6YYK4 115 aa15.31■□□□□ 0.04
COL9A3-204ENST00000463487 DEFA5Q01523 94 aa15.31■□□□□ 0.04
COL9A3-204ENST00000463487 SPINK9Q5DT21 86 aa15.31■□□□□ 0.04
COL9A3-204ENST00000463487 C19orf35Q6ZS72 473 aa15.31■□□□□ 0.04
COL9A3-204ENST00000463487 DUSP18Q8NEJ0 188 aa15.31■□□□□ 0.04
COL9A3-204ENST00000463487 MITD1Q8WV92 249 aa15.31■□□□□ 0.04
COL9A3-204ENST00000463487 RCC1LQ96I51 464 aaKnown RBP15.31■□□□□ 0.04
COL9A3-204ENST00000463487 GPN1Q9HCN4 374 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-204ENST00000463487 HEYLQ9NQ87 328 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-204ENST00000463487 ANKRD34BA5PLL1 514 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 CORTO00230 105 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 TNFRSF9Q07011 255 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 GGNBP1Q5YKI7 109 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 NRARPQ7Z6K4 114 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 NOXA1Q86UR1 476 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 WFDC9Q8NEX5 89 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 VN1R17PQ8TDU5 208 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 ZNF431Q8TF32 576 aaPredicted RBP15.3■□□□□ 0.04
COL9A3-204ENST00000463487 PALMDQ9NP74 551 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 HSPB7Q9UBY9 170 aa15.3■□□□□ 0.04
COL9A3-204ENST00000463487 IGHV4OR15-8A0A075B7B6 117 aa15.29■□□□□ 0.04
COL9A3-204ENST00000463487 A0A087WW49 117 aa15.29■□□□□ 0.04
COL9A3-204ENST00000463487 FAM90A26D6RGX4 464 aa15.29■□□□□ 0.04
COL9A3-204ENST00000463487 MED6O75586 246 aa15.29■□□□□ 0.04
COL9A3-204ENST00000463487 NDUFB8O95169 186 aa15.29■□□□□ 0.04
COL9A3-204ENST00000463487 HTR2BP41595 481 aa15.29■□□□□ 0.04
COL9A3-204ENST00000463487 MISP3Q96FF7 219 aa15.29■□□□□ 0.04
COL9A3-204ENST00000463487 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.28■□□□□ 0.04
COL9A3-204ENST00000463487 PRAF2O60831 178 aa15.28■□□□□ 0.04
COL9A3-204ENST00000463487 NXPH3O95157 252 aa15.28■□□□□ 0.04
COL9A3-204ENST00000463487 IL5P05113 134 aa15.28■□□□□ 0.04
COL9A3-204ENST00000463487 TATDN3Q17R31 274 aa15.28■□□□□ 0.04
COL9A3-204ENST00000463487 RPEL1Q2QD12 228 aa15.28■□□□□ 0.04
COL9A3-204ENST00000463487 OR52B4Q8NGK2 314 aa15.28■□□□□ 0.04
COL9A3-204ENST00000463487 GAR1Q9NY12 217 aaKnown RBP15.28■□□□□ 0.04
COL9A3-204ENST00000463487 DTD1Q8TEA8 209 aa15.27■□□□□ 0.04
COL9A3-204ENST00000463487 ATP6V0BQ99437 205 aa15.27■□□□□ 0.04
COL9A3-204ENST00000463487 INMT-MINDY4F8WBC2 141 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 PITX3O75364 302 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 ADAP1O75689 374 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 LY86O95711 162 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 PTTG1O95997 202 aa15.26■□□□□ 0.03
COL9A3-204ENST00000463487 HOXD3P31249 432 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms