RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 IGLV2-8P01709 118 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 PI4KAP42356 2102 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 DUSP3P51452 185 aaPredicted RBP11.29□□□□□ -0.6
PTPRE-204ENST00000455661 TBR1Q16650 682 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 RNF151Q2KHN1 245 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 RPL39P5Q59GN2 51 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 TMEM251Q8N6I4 163 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 OR8B3Q8NGG8 313 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 OR4S2Q8NH73 311 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 OR8B2Q96RD0 313 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 TRIB1Q96RU8 372 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 DCTN5Q9BTE1 182 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 A0A1W2PRE2 83 aa11.28□□□□□ -0.6
PTPRE-204ENST00000455661 IGLL1P15814 213 aa11.28□□□□□ -0.6
PTPRE-204ENST00000455661 CEACAM8P31997 349 aaPredicted RBP11.28□□□□□ -0.6
PTPRE-204ENST00000455661 HOXA4Q00056 320 aaPredicted RBP11.28□□□□□ -0.6
PTPRE-204ENST00000455661 KLF5Q13887 457 aaPredicted RBP11.28□□□□□ -0.6
PTPRE-204ENST00000455661 SPACA3Q8IXA5 215 aa11.28□□□□□ -0.6
PTPRE-204ENST00000455661 KLF14Q8TD94 323 aaPredicted RBP11.28□□□□□ -0.6
PTPRE-204ENST00000455661 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
PTPRE-204ENST00000455661 ABI3Q9P2A4 366 aa11.28□□□□□ -0.6
PTPRE-204ENST00000455661 GGTLC3B5MD39 225 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 COL8A2P25067 703 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 MPV17P39210 176 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 EBLN2Q6P2I7 272 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 RNASEKQ6P5S7 137 aaKnown RBP11.27□□□□□ -0.6
PTPRE-204ENST00000455661 WDR82Q6UXN9 313 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 FAM214BQ7L5A3 538 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 OR4F17Q8NGA8 305 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 CT55Q8WUE5 264 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 OR2V2Q96R30 315 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 FOXA2Q9Y261 457 aaPredicted RBP11.27□□□□□ -0.6
PTPRE-204ENST00000455661 PTPRBP23467 1997 aa11.27□□□□□ -0.6
PTPRE-204ENST00000455661 CFAP54Q96N23 3096 aa11.27□□□□□ -0.61
PTPRE-204ENST00000455661 CA1P00915 261 aaPredicted RBP11.27□□□□□ -0.61
PTPRE-204ENST00000455661 MFAP2P55001 183 aa11.27□□□□□ -0.61
PTPRE-204ENST00000455661 C6orf15Q6UXA7 325 aaPredicted RBP11.27□□□□□ -0.61
PTPRE-204ENST00000455661 LOXL4Q96JB6 756 aa11.27□□□□□ -0.61
PTPRE-204ENST00000455661 HINT2Q9BX68 163 aa11.27□□□□□ -0.61
PTPRE-204ENST00000455661 GSX1Q9H4S2 264 aaPredicted RBP11.27□□□□□ -0.61
PTPRE-204ENST00000455661 A0A1W2PN81 502 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 AHRRA9YTQ3 701 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 FAM162BQ5T6X4 162 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 ZNF503Q96F45 646 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 GRAMD2BQ96HH9 432 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 SSBP3Q9BWW4 388 aaPredicted RBP11.26□□□□□ -0.61
PTPRE-204ENST00000455661 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 TET2Q6N021 2002 aaPredicted RBP11.26□□□□□ -0.61
PTPRE-204ENST00000455661 CFIP05156 583 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 LRRC10Q5BKY1 277 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 CHRDL1Q9BU40 450 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 TNFRSF19Q9NS68 423 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 TMEM14BQ9NUH8 114 aa11.26□□□□□ -0.61
PTPRE-204ENST00000455661 C8orf88P0DMB2 117 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 IGFBP4P22692 258 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 PRDX2P32119 198 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 OR4A47Q6IF82 309 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 ETFRF1Q6IPR1 90 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 FAM90A1Q86YD7 464 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 CD177Q8N6Q3 437 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 NHLRC2Q8NBF2 726 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 FAM168AQ92567 244 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 TMEM70Q9BUB7 260 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 ZNF576Q9H609 170 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 DOCK7Q96N67 2140 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 C2orf70A6NJV1 201 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 TIMM8AO60220 97 aaPredicted RBP11.25□□□□□ -0.61
PTPRE-204ENST00000455661 FAM231DQ6ZW35 169 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 PPP1R35Q8TAP8 253 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 IFI27L2Q9H2X8 130 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 ZNF355PQ9NSJ1 428 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 PILRBQ9UKJ0 227 aa11.25□□□□□ -0.61
PTPRE-204ENST00000455661 IGHV3-13P01766 116 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 IGHV3-7P01780 117 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 RPS20P60866 119 aaKnown RBP11.24□□□□□ -0.61
PTPRE-204ENST00000455661 RPL8P62917 257 aaKnown RBP11.24□□□□□ -0.61
PTPRE-204ENST00000455661 NUP35Q8NFH5 326 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 ZNF596Q8TC21 504 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 DDB2Q92466 427 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 ST20Q9HBF5 79 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 OR51B2Q9Y5P1 312 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 OR2J3O76001 311 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 PPBPP02775 128 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 ZNF134P52741 427 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 ARG2P78540 354 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 SMIM15Q7Z3B0 74 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 MRPL32Q9BYC8 188 aaKnown RBP11.24□□□□□ -0.61
PTPRE-204ENST00000455661 DUSP13Q9UII6 198 aa11.24□□□□□ -0.61
PTPRE-204ENST00000455661 WDFY3Q8IZQ1 3526 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 J3QR06 171 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 GATA2P23769 480 aaPredicted RBP11.23□□□□□ -0.61
PTPRE-204ENST00000455661 INO80CQ6PI98 192 aaPredicted RBP11.23□□□□□ -0.61
PTPRE-204ENST00000455661 LRRC29Q8WV35 223 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 MBD6Q96DN6 1003 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 FAM122AQ96E09 287 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 SLC25A33Q9BSK2 321 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 PRNDQ9UKY0 176 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 DOCK10Q96BY6 2186 aa11.23□□□□□ -0.61
PTPRE-204ENST00000455661 OR4C46A6NHA9 309 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms