RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 PSMB3P49720 205 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 KLF3P57682 345 aaPredicted RBP1.94□□□□□ -2.1
VPS8-211ENST00000452140 C1QTNF8P60827 252 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 HOXC5Q00444 222 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 CAV1Q03135 178 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 TNFRSF9Q07011 255 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 PMAIP1Q13794 54 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 DEFB134Q4QY38 66 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 C1orf194Q5T5A4 169 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 HES3Q5TGS1 186 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 ZNF660Q6AZW8 331 aaPredicted RBP1.94□□□□□ -2.1
VPS8-211ENST00000452140 C3orf33Q6P1S2 294 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 Q6ZRU5 148 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 ZNF767PQ75MW2 155 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 DEFB107AQ8IZN7 70 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 C9orf62Q8N4C0 152 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 UBL4BQ8N7F7 174 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 ZNF676Q8N7Q3 588 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 YIPF7Q8N8F6 280 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 OR2M3Q8NG83 312 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 OR2D3Q8NGH3 330 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 OR5K1Q8NHB7 308 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 GRPEL2Q8TAA5 225 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 C1orf54Q8WWF1 131 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 S100ZQ8WXG8 99 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 SLC25A44Q96H78 314 aaPredicted RBP1.94□□□□□ -2.1
VPS8-211ENST00000452140 SFRP2Q96HF1 295 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 TBX5Q99593 518 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 PLA2G12AQ9BZM1 189 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 ULBP3Q9BZM4 244 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 C20orf27Q9GZN8 174 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 OR51I2Q9H344 312 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 NMNAT1Q9HAN9 279 aaPredicted RBP1.94□□□□□ -2.1
VPS8-211ENST00000452140 C19orf12Q9NSK7 152 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 C14orf105Q9NVL8 296 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 LINC00527Q9UJ94 153 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 CARHSP1Q9Y2V2 147 aaKnown RBP1.94□□□□□ -2.1
VPS8-211ENST00000452140 AP4S1Q9Y587 144 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 NFAT5O94916 1531 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 SIPA1L3O60292 1781 aaPredicted RBP1.94□□□□□ -2.1
VPS8-211ENST00000452140 NID2Q14112 1375 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 ARAP2Q8WZ64 1704 aa1.94□□□□□ -2.1
VPS8-211ENST00000452140 PLXND1Q9Y4D7 1925 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 RREB1Q92766 1687 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 ALS2Q96Q42 1657 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 EDC4Q6P2E9 1401 aaKnown RBP1.93□□□□□ -2.1
VPS8-211ENST00000452140 UBR2Q8IWV8 1755 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 ZNF106Q9H2Y7 1883 aaKnown RBP1.93□□□□□ -2.1
VPS8-211ENST00000452140 PIK3C2BO00750 1634 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 TMED7-TICAM2A0A0A6YYA0 188 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 EXOC1LA0A1B0GW35 172 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 FAM25AB3EWG3 89 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 FAM25CB3EWG5 89 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 FAM25GB3EWG6 89 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 C4orf51C9J302 202 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 INMT-MINDY4F8WBC2 141 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 K7EPK0 472 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 SLC37A4O43826 429 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 OR7C1O76099 320 aaPredicted RBP1.93□□□□□ -2.1
VPS8-211ENST00000452140 IFNA21P01568 189 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 TRAPPC2P0DI81 140 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 TRAPPC2BP0DI82 140 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 COX4I1P13073 169 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 GTF2F2P13984 249 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 CBR1P16152 277 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 ELK4P28324 431 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 OR1E2P47887 323 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 RAB13P51153 203 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 TMBIM6P55061 237 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 NCS1P62166 190 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 LSM3P62310 102 aaKnown RBP1.93□□□□□ -2.1
VPS8-211ENST00000452140 RPS24P62847 133 aaKnown RBP1.93□□□□□ -2.1
VPS8-211ENST00000452140 HERVK_113P63121 156 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 BTN3A2P78410 334 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 FABP5Q01469 135 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 ZNF181Q2M3W8 571 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 FAM74A1Q5RGS3 127 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 MRPL2Q5T653 305 aaKnown RBP1.93□□□□□ -2.1
VPS8-211ENST00000452140 LAIR2Q6ISS4 152 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 SCIMPQ6UWF3 145 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 ZCCHC23Q6ZST2 131 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 SLC36A1Q7Z2H8 476 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 ZNF550Q7Z398 422 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 ZBTB8OSQ8IWT0 167 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 OR8S1Q8NH09 359 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 OR4X1Q8NH49 305 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 C2orf15Q8WU43 125 aaKnown RBP1.93□□□□□ -2.1
VPS8-211ENST00000452140 TVP23CQ96ET8 276 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 ACY3Q96HD9 319 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 OR2V2Q96R30 315 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 OR7D2Q96RA2 312 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 RNASE7Q9H1E1 156 aaKnown RBP1.93□□□□□ -2.1
VPS8-211ENST00000452140 ABCG5Q9H222 651 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 IDI2-AS1Q9NZ38 188 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 SS18L2Q9UHA2 77 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 TAC3Q9UHF0 121 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 ZNF230Q9UIE0 474 aaPredicted RBP1.93□□□□□ -2.1
VPS8-211ENST00000452140 NDUFAF1Q9Y375 327 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 UFC1Q9Y3C8 167 aa1.93□□□□□ -2.1
VPS8-211ENST00000452140 PXMP4Q9Y6I8 212 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms