RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CMTM1Q8IZ96 169 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 MARC2Q969Z3 335 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 BSCL2Q96G97 398 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-203ENST00000430038 GGTLC1Q9BX51 225 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 C21orf62Q9NYP8 219 aa12.69□□□□□ -0.38
CPSF4-203ENST00000430038 LOC102724200A0A096LPH7 203 aaPredicted RBP12.68□□□□□ -0.38
CPSF4-203ENST00000430038 I3L2K1 104 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 TNFAIP8O95379 198 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 APOA1P02647 267 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 RNASE12Q5GAN4 147 aaKnown RBP12.68□□□□□ -0.38
CPSF4-203ENST00000430038 RBPMS2Q6ZRY4 209 aaKnown RBP12.68□□□□□ -0.38
CPSF4-203ENST00000430038 OR2C3Q8N628 320 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 UBAC2Q8NBM4 344 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 OR1L6Q8NGR2 347 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 BORCS5Q969J3 196 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 KLK11Q9UBX7 282 aa12.68□□□□□ -0.38
CPSF4-203ENST00000430038 NDUFA4O00483 81 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 TSPAN4O14817 238 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 SNAPC5O75971 98 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 PI3P19957 117 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 TSPAN5P62079 268 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 ZNF124Q15973 351 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 HSD17B13Q7Z5P4 300 aaPredicted RBP12.67□□□□□ -0.38
CPSF4-203ENST00000430038 MRGPRFQ96AM1 343 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 C20orf24Q9BUV8 137 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 DAZ1Q9NQZ3 744 aaKnown RBP12.67□□□□□ -0.38
CPSF4-203ENST00000430038 PRNDQ9UKY0 176 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 KMT2AQ03164 3969 aa12.67□□□□□ -0.38
CPSF4-203ENST00000430038 IGHV3-49A0A0A0MS15 119 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 IGKV1-5P01602 117 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 UCP3P55916 312 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 CTF1Q16619 201 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 SPSB3Q6PJ21 355 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 OR1P1Q8NH06 330 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 CMTM3Q96MX0 182 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 RNF2Q99496 336 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 SCPEP1Q9HB40 452 aa12.66□□□□□ -0.38
CPSF4-203ENST00000430038 CTSDP07339 412 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-203ENST00000430038 P0C879 139 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 SMIM18P0DKX4 95 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 RCVRNP35243 200 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 ANKRD55Q3KP44 614 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 Q56UQ5 140 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 LHFPL1Q86WI0 220 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 LILRB2Q8N423 598 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 OR4D10Q8NGI6 311 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 ABHD1Q96SE0 405 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 SPAG8Q99932 426 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-203ENST00000430038 FAM212BQ9NTI7 297 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-203ENST00000430038 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
CPSF4-203ENST00000430038 A0A0B4J293 547 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 K7EMT4 169 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 PRCDQ00LT1 54 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 IL17DQ8TAD2 202 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 MISP3Q96FF7 219 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 TMEM56Q96MV1 263 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 TP53RKQ96S44 253 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 ATP6V0BQ99437 205 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 VCX3AQ9NNX9 186 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 FKBP11Q9NYL4 201 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 AGRNO00468 2067 aa12.64□□□□□ -0.39
CPSF4-203ENST00000430038 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 A0A0J9YWU9 116 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 SMIM31A0A1B0GVY4 71 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 CHEK1O14757 476 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 MT-CO2P00403 227 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 CD3DP04234 171 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 HSPE1P61604 102 aaKnown RBP12.63□□□□□ -0.39
CPSF4-203ENST00000430038 DEFB135Q30KP9 77 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 LPCAT3Q6P1A2 487 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 APRG1Q8IVJ8 170 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 SLC38A6Q8IZM9 456 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 OR10C1Q96KK4 312 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 FRAS1Q86XX4 4008 aa12.63□□□□□ -0.39
CPSF4-203ENST00000430038 A0A0G2JRQ6 117 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 IGHV7-4-1A0A0J9YVY3 117 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 CYB5BO43169 146 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 APOHP02749 345 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 RPL35AP18077 110 aaKnown RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 FCGR2BP31994 310 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 RORCP51449 518 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 FAM90A2PQ658T7 463 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 ZNF114Q8NC26 417 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 OR4A16Q8NH70 328 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 RHPN1-AS1Q9BWJ2 59 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 NXF2Q9GZY0 626 aaKnown RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 MIXL1Q9H2W2 232 aa12.62□□□□□ -0.39
CPSF4-203ENST00000430038 MRPL36Q9P0J6 103 aaKnown RBP12.62□□□□□ -0.39
CPSF4-203ENST00000430038 MFAP4P55083 255 aa12.61□□□□□ -0.39
CPSF4-203ENST00000430038 RND3P61587 244 aa12.61□□□□□ -0.39
CPSF4-203ENST00000430038 MLANAQ16655 118 aa12.61□□□□□ -0.39
CPSF4-203ENST00000430038 SP6Q3SY56 376 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms